| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0013 |
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| Symbol | |
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| ID | 7973971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 13407 |
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| End bp | 14135 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644790615 |
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| Product | Endonuclease/exonuclease/phosphatase |
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| Protein accession | YP_002941942 |
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| Protein GI | 239813032 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3568] Metal-dependent hydrolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.914403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGGTGA ACACCCACAA GGGCTTCACC GCGCTCAACC GCAAGTTCAT CCTGCCGGAG
CTGCGCGACG CGGTGCGCAC GGTGGGAGCC GACGTGGTGT TTCTGCAGGA AGTGCTCGGC
ACCCATTCGC GCCACTCGCG CAAGGTCAAC AACTGGCCCG AGGCGCCGCA CTACGAATTC
CTGGCCGACA CCATGTGGCC GCAGTTCGCC TATGGCCGCA ACGCCGTGTA CCCGAGGGGC
CATCACGGCA ACGCGGTGCT GTCCAAGTTT CCGATCGTGC ATTTCCGCAA CCATGACGTG
TCGGTGGCCG GGCCCGAAAA GCGCGGCCTG CTCCATTGCG TGCTGCGCCT GCCGGGCCGC
ACGGTCGACG TCCACGCGAT CTGCGCACAT CTCGGCCTGG CCGAGGCGCA CCGGCAGCAG
CAGCTCGAAC TGCTGCTGCA CATCGTGCGC GACGAGGTGC CGGCCGACGC GCCGCTGATC
GTCGCAGGCG ACTTCAACGA CTGGCGCGGC CGCGCCCACC AGGTGCTGGA GGAAGGCGCC
GCGCTGCGCG AGGTCTTCGT GCATGCGAAC GGCTCGGCCG CCAAGACCTT TCCGGCGCGC
TTTCCGCTGC TGCCTCTGGA CCGCATCTAT GTTCGCAACG CGGGCGTGCA TGCGCCCGTG
GTGCTGCCGC GCAAGCCCTG GTCGCACCTG TCGGACCATG CGCCGCTGGT GGCGAACATT
GATCTTTGA
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| Protein sequence | MTVNTHKGFT ALNRKFILPE LRDAVRTVGA DVVFLQEVLG THSRHSRKVN NWPEAPHYEF
LADTMWPQFA YGRNAVYPRG HHGNAVLSKF PIVHFRNHDV SVAGPEKRGL LHCVLRLPGR
TVDVHAICAH LGLAEAHRQQ QLELLLHIVR DEVPADAPLI VAGDFNDWRG RAHQVLEEGA
ALREVFVHAN GSAAKTFPAR FPLLPLDRIY VRNAGVHAPV VLPRKPWSHL SDHAPLVANI
DL
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