Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_p840_60 |
Symbol | |
ID | 6961471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011311 |
Strand | - |
Start bp | 70039 |
End bp | 71070 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_002261550 |
Protein GI | 215778410 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 0.834031 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATGCA ATAATCAAAA TTGTAATTAT GACATCGATA ATATCTGTAT TGATGGACTA ACTAGTGAAG ATTGTCCAAA CTTAGTAGAT TTCTCTCAAC TAGAGTTAGT TACCCCTGAT TCAATAACTG AAGTTGATGA TAGAGGTGTG TATACAGACA CTTTAAATGC TCAACAATCA GGAGCAACAG AAAAAACTCT ATTTCCCGGA CAAATTCCAC TATCTATAGA TGAGGTTCAA ACTAGACTAA AAGATAGACT AGGTAAGATT GTATCCTTTA TCGGGCCTGT AGGGGTTGGT AAAACAACTT TAATTTCTAG TTTGTATGAT GTTTTCAGTA AAGAAAATGA GACTCAAGTA TTATTTGGTG GTTCTGACAC TCTTTATGCG TTTGAGAGTT CATGTCATCA TGCGCGAGTC ACCTCTAGAG GTTCTACAGT ATCAACGCCT AGGACTTCAT CTACCGAAGG CGTTGGTTTT TACCACCTTT CAATACAAGA TAGCAAGAAA ATTCGTCAGG AATTTTTTCT GGCTGATCGT TCCGGTGAAA GTTACTCAGA AATGGTGAAT AACTTATCAT TAGTGGATAG TTTTGAAGAA CTCTTAAGAA GCGACTTATT ATTATTTATG GTTGATTCAT CTAGCTTAGT TGATAATAAA CAAAGACATA GAGCACGACG AACAACAATA AAACTAATTC AATCACTCTT TGAGTATAAC ACTCTGCCAA AAAATACTAA CTGTGCAATT GTCTTGACAA AGTTTGACCT AGTCGTAGAA GAAAATAACG AAACGGTTTG TATGTCTGAA GCTAAACGAA TTGTTGACGA TGTACAGAAG TATTTGGATA CTCCTATTGA TATACTCTCA ATCTCAGCTA GACCCAATAG TGAAGGACAT GCTCGCCCAG ATTTCTTCAA AATTTTATGG CAGAAATTAG AGTCATCACA ACGTCCCCAA AAAAAATGCC CTTTAAATAA ATATAAAACA AATCGTAGCT TTCACAATTT GGAATTAATG TATGAATATT AA
|
Protein sequence | MKCNNQNCNY DIDNICIDGL TSEDCPNLVD FSQLELVTPD SITEVDDRGV YTDTLNAQQS GATEKTLFPG QIPLSIDEVQ TRLKDRLGKI VSFIGPVGVG KTTLISSLYD VFSKENETQV LFGGSDTLYA FESSCHHARV TSRGSTVSTP RTSSTEGVGF YHLSIQDSKK IRQEFFLADR SGESYSEMVN NLSLVDSFEE LLRSDLLLFM VDSSSLVDNK QRHRARRTTI KLIQSLFEYN TLPKNTNCAI VLTKFDLVVE ENNETVCMSE AKRIVDDVQK YLDTPIDILS ISARPNSEGH ARPDFFKILW QKLESSQRPQ KKCPLNKYKT NRSFHNLELM YEY
|
| |