8 homologs were found in PanDaTox collection
for query gene VSAL_p840_54 on replicon NC_011311
Organism: Aliivibrio salmonicida LFI1238



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011311  VSAL_p840_54  hypothetical protein  100 
 
 
94 aa  192  1e-48  Aliivibrio salmonicida LFI1238  Bacteria  hitchhiker  0.000360582  n/a   
 
 
-
 
NC_009456  VC0395_0742  CopG family transcriptional regulator  72.83 
 
 
122 aa  138  1.9999999999999998e-32  Vibrio cholerae O395  Bacteria  normal  0.716439  n/a   
 
 
-
 
NC_011138  MADE_02179  RelB protein  64.13 
 
 
94 aa  125  2.0000000000000002e-28  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0521449  n/a   
 
 
-
 
NC_009654  Mmwyl1_0666  RelB protein  37.04 
 
 
64 aa  45.4  0.0002  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1150  RelB protein  41.77 
 
 
94 aa  45.8  0.0002  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2580  transcriptional regulator, CopG family  41.77 
 
 
94 aa  45.8  0.0002  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0407  putative DNA-damage-inducible protein J  38.82 
 
 
94 aa  43.9  0.0007  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2192  RelB protein  74.07 
 
 
30 aa  43.1  0.001  Shewanella putrefaciens CN-32  Bacteria  normal  0.613245  n/a   
 
 
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