Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_p840_10 |
Symbol | traW |
ID | 6961433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011311 |
Strand | + |
Start bp | 7063 |
End bp | 7719 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | conjugative transfer protein TraW |
Protein accession | YP_002261500 |
Protein GI | 215778360 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 75 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCGT CAATCCTATT GCTCACCCTT GTGCTTTTAA GTCCGTCTCT TCACGCGAAA TCCATGGGCG TTGCCGGTGC CATTTTCCCC ATTGGGGAAA TCGACATGTT GCTCTGGATA GAGCAGCGCC TACAACGCTT TGAAGCCAAC GGCCAAATGG ACATCATGAA AAACGACATG AAACAGGCGG TAAAAAAACA AGTCGAGCGA CCAACACCGG TTCTGGGGCT TGGCACAACC ACCGAGCCCA CGACGTTTAC GGTAAATCCC ACGCTGCGAT TAGGCAAAGA CGTCATGGAC GCCCAGGGCC GTCTTTTGTT CGCCAAAGGA ATGGAGATTA ACCCGTTTGA CAGCACCACC TGGCCAAACG GCGAGTACCC CGCGTTTGAG TTCAGTAAAA CCCTTGTCTT CATTGATGGC GATGATGAAA AGCAACTTGC GTGGGCCAAG CAATACCGCA CTAACAAACC CATCAAGTGG ATACTAATCA ATGGGAGTAT CAATAAGAGC GCCCTTGCAC TGAACACTCG AGTCTACTTT GACCAAAAAG GCACACTGAC ACGCGCACTC AAACTCAAAA ACACCCCCTC AGTGGTTATG CAGGTGGGGA CGCAATGGCA AATTCAAGAG GTTGATGTCT CACATCAACC TCGATAA
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Protein sequence | MKPSILLLTL VLLSPSLHAK SMGVAGAIFP IGEIDMLLWI EQRLQRFEAN GQMDIMKNDM KQAVKKQVER PTPVLGLGTT TEPTTFTVNP TLRLGKDVMD AQGRLLFAKG MEINPFDSTT WPNGEYPAFE FSKTLVFIDG DDEKQLAWAK QYRTNKPIKW ILINGSINKS ALALNTRVYF DQKGTLTRAL KLKNTPSVVM QVGTQWQIQE VDVSHQPR
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