Gene VSAL_p840_04 details

Gene Information

• Locus tag: VSAL_p840_04
• Symbol: traE
• ID: 6961427
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011311
• Strand: +
• Start bp: 1035
• End bp: 1595
• Gene Length: 561 bp
• Protein Length: 186 aa
• Translation table: 11
• GC content: 47%
• Product: conjugative transfer protein TraE
• Protein accession: YP_002261494
• Protein GI: 215778354

Plasmid Coverage information

• Num covering plasmid clones: 54
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGAACT CCAATAAGAT TGATTTCATC GCCCTATCAA AAGCCCTCAA TAAGCTGCTG 
CTTATTGGCT TTGTGCTTTC ACTTGTGGTC AGCATTACCC TTGCTTTGGG TCTTTTATCT 
CTGGCAAACA ACAAAAGCCG TACGCTCGTG CCACCGTCAA TATCAAAAGC CTTCACCGTC 
TCAGATGGCA CCATCGATGA GAGTTACGCC AGTCAAATGG CCGAGTACAT TCTGTATTTA 
AAACTCAACG TCACTCCCGC GAACGTGGAG CGCCAATTCT CGCAGCTGTT GGATTACGCC 
AACGCCGACG CCTGGTCTAG TGTGCAACCG CAACTGGTCA GAGAATCCGT CCTTATTAAA 
AAATCCAATC TATCGAGCAC CTTCTCTGTC TCCAGAGTCG AGGTCGCGAT GGACTCGCTC 
ATTGTTAACG TTCACGGGGT ATTGAATAAA TCCGTGGGTG ACAGAGCACT GACTCCAGTG 
TCTTGTTCGT ATTTGATTTA CCTGAAATAC GAACAAGGCA CGTTAACCTT TAGCAGCATC 
AAAAAGGAGG CTCAATCATG A 

 

Protein sequence

MLNSNKIDFI ALSKALNKLL LIGFVLSLVV SITLALGLLS LANNKSRTLV PPSISKAFTV 
SDGTIDESYA SQMAEYILYL KLNVTPANVE RQFSQLLDYA NADAWSSVQP QLVRESVLIK 
KSNLSSTFSV SRVEVAMDSL IVNVHGVLNK SVGDRALTPV SCSYLIYLKY EQGTLTFSSI 
KKEAQS