| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II1044 |
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| Symbol | |
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| ID | 6962355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 1139254 |
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| End bp | 1140138 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643382291 |
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| Product | HTH-type transcriptional regulator, LysR-family |
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| Protein accession | YP_002265322 |
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| Protein GI | 209809783 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACCA GTCAAATTGA AATGTTTTTA TATACTGTTG AAATGGGGTC AATTGCAGAA
GCAGCCCGCA AACTTCAAAA AAGCAGAACT ACAGTCAGTG CCGCGTTAAA TGCATTAGAA
GATGAGCTTA ATACCGTCTT ATTAACTCGC ACAGGAAACC GCATTACTCC AACAGAAATA
GGCGAATCCC TTGTTCATGA TTTTCAACGA ATGTCACTGA TCAGCAATGA TATTGAAAAC
AAGTGCTTTC AATACAATAA CGGGGTCGCC TCTACAATTC GTGTCGTTCG TGATGATGCA
TTACCTGAAG TGGTTTGGCG TCAAATATTA GGTAAAATGA GTCGTAAATT CCCAAGCACC
AGTATTTCAA TTTATGTCGC CCCTTCTCCT GAATTAGAAG AAATGGTTGA GCAAAACATT
GTTGATGTTG CTTATGGTTT ACTGCCTATA AATAATGAAT TATTGCATGT ACAGCAAAAT
GAATTAGGCC AAATACGAAT GATGTCTGTC GCCCATAAAG ATCATCCTTT AAGTCAACTC
AGAAAAGTGA ACTTAACCGA TCTTGAAAGC AATACCGAAA TCATAGTAAA TTATATTGAT
GAAGATGGAC TAATGGTCGT TGAACCAAAA TCAAGTAAGT ATATTGCACT TACTTTTTAT
GAACACTTAC GAGATGCAGT ATTAGATAAA ACAGGTTGGT CTTCAGTTCC TTCGCTTTTA
ATCAATGAAC ATTTACGAGA TGGGACATTG AAAGTGCTTA AACATAACCG TGCGATGAAT
TGGCAATCTT TTGCTGAAAT GACAAAAGCA ACCATGCCTC GTGGCGTCAT TATTGATTGG
TTATCAGAGC AAGTAGAAGA TTATTTATTG GAAGTGTCTG AATAG
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| Protein sequence | MKTSQIEMFL YTVEMGSIAE AARKLQKSRT TVSAALNALE DELNTVLLTR TGNRITPTEI
GESLVHDFQR MSLISNDIEN KCFQYNNGVA STIRVVRDDA LPEVVWRQIL GKMSRKFPST
SISIYVAPSP ELEEMVEQNI VDVAYGLLPI NNELLHVQQN ELGQIRMMSV AHKDHPLSQL
RKVNLTDLES NTEIIVNYID EDGLMVVEPK SSKYIALTFY EHLRDAVLDK TGWSSVPSLL
INEHLRDGTL KVLKHNRAMN WQSFAEMTKA TMPRGVIIDW LSEQVEDYLL EVSE
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