| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II1012 |
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| Symbol | |
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| ID | 6962324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 1109534 |
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| End bp | 1111270 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643382261 |
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| Product | response regulator, histidine kinase |
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| Protein accession | YP_002265292 |
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| Protein GI | 209809753 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAACG ATAAAATGAT TGAATTATTA AATCGGAAAA TCCAACGAGA AAAAGCTTCT
CGTAAGGCTG CGGAAGGCTT GCTTGAACAA AAGAGTCATG AGCTTTTTAT TGCGAAACAG
TTAGTTGAAG AAACGCTGTT AATTGTACAA GAAAAGGCAG AAAAAGACGT GGCTTTGCTT
CAATTCAAAG GATACCTCGA TGCGATTCTT CTTGATTACA ATCAAGCGTT TTTACAAGAA
GCGCCATCGA GCACGTTACT GCAACGTTTA TTGGATGATT TAGTTAGCAT TGAGGGGATT
GCTTCTTTGC GATTAACGGT CGCACCAACG TTAAGTGACA ATGTTCAATC CATTTTAAAT
GCCGGAGAGG TAGGTGAGTA TCACGATCTT CCACACTCAA CTTCCGAGTT TAATTGGAGT
GAAGATACGG TTCATATATT AGTTTATTTA CACCAAAATG ATGAACGTTG TGGGGCGTTG
CAATTTACGT TTAACACTCC GCCAAGCGAA ACGTGGCATC AAACTATTGA AAAGCAGTTT
TGTTTATTTT CAGAGATGTT AAGTGCCGCT TTTGTGCGTC AGCAGTTACT TGAAAACACA
ATAAAAGAAA AGCAGAGAGC AGAGAACTCA GAGCAAGCGA CCCGTGATTT TGTTGCGATG
ATAAATCATG AGTTAAGAAC TCCGCTTAAT GGTCTGCTAG GTTCGGCTGA GTTGATGGAA
GACACGAATA TTACTCAGTA TCAACAAACA CTTTTAATGA CGATTCATCA AGCGGGTGAA
ATGCTTAGAG TGATCATTAA TGATTTACTC GACTTCAGTA AAATGAATGC AGGTATGCTT
CAATTAAGCA TTACCCAGTT TTCACCCCAA ATATTGATTC AGACGATTGA ACAAATGTTT
TTACATCAAA TTGAAGAAAC AAGATTAGAG TTTGTGGTTG GTATAGAGAA TACTTTACCG
GATGGATTAT CTGGAGACAT TGACCGTATC CAACAAATAT TGGTAAACCT TATTGGGAAC
GCAATTAAGT TTACAAAAGA AGGCGAGATC CGATTTTCAG CTTCTTGGAA AGATAATGTC
TTATGTTTTA CAGTGTCTGA CAGTGGTTGC GGTATTCCAT TAGATAAACA ATCCACGTTA
TTTGATCCCT TTACTCAAGT CGATAATTCC AGTCAACGAC AGTTTGAAGG AACAGGACTT
GGATTGTCTA TTTGTAAATC CTTAATTGAT AAGATGGAAG GGACATTAAC GCTTGAAAGT
GAATTAGGGA AAGGCTCAGT TTTTTCTGTT GAGATCCCAT TAATTCCTAC GTATGAAACG
AAAGTCAAAG AGCAGGAAAC GTTTGATATC AGCCATTCTA TTGGAGGCTT GTCGGTACTT
GCGGTTGAAG ACATTAAGAT GAATCAAGTG ATCTTAAGTA TGATGCTGAC TAAGCTAGAT
ATACATCCTT ACTTTGCGAA CGATGGGCAA CAAGCCTTAG CTTTTTTAGA GAGTGAAGTG
GTTGATGTAA TTTTAATGGA TTGTCGAATG CCAGTGATGG ACGGGTTTGA AACGACAAGA
CGATTACGCG AACAAGGCTA CACAAAGCCA ATTATTGCTC TGACAGCAGG AACAACGTCA
ACTGAAATGG CAAGTTGTAT AGAGGCCGGA ATGGACGATA TTTTGCATAA GCCCTATAAA
GCAAAAGAGC TAGAAAAGAT GTTAAAAGTT TGGAGTGTTC GACTTGTCTC GTCTTAA
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| Protein sequence | MDNDKMIELL NRKIQREKAS RKAAEGLLEQ KSHELFIAKQ LVEETLLIVQ EKAEKDVALL
QFKGYLDAIL LDYNQAFLQE APSSTLLQRL LDDLVSIEGI ASLRLTVAPT LSDNVQSILN
AGEVGEYHDL PHSTSEFNWS EDTVHILVYL HQNDERCGAL QFTFNTPPSE TWHQTIEKQF
CLFSEMLSAA FVRQQLLENT IKEKQRAENS EQATRDFVAM INHELRTPLN GLLGSAELME
DTNITQYQQT LLMTIHQAGE MLRVIINDLL DFSKMNAGML QLSITQFSPQ ILIQTIEQMF
LHQIEETRLE FVVGIENTLP DGLSGDIDRI QQILVNLIGN AIKFTKEGEI RFSASWKDNV
LCFTVSDSGC GIPLDKQSTL FDPFTQVDNS SQRQFEGTGL GLSICKSLID KMEGTLTLES
ELGKGSVFSV EIPLIPTYET KVKEQETFDI SHSIGGLSVL AVEDIKMNQV ILSMMLTKLD
IHPYFANDGQ QALAFLESEV VDVILMDCRM PVMDGFETTR RLREQGYTKP IIALTAGTTS
TEMASCIEAG MDDILHKPYK AKELEKMLKV WSVRLVSS
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