Gene VSAL_II0883 details

Gene Information

• Locus tag: VSAL_II0883
• ID: 6962220
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011313
• Strand: +
• Start bp: 968097
• End bp: 968717
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 643382151
• Product: amino acid transport protein, LysE type
• Protein accession: YP_002265182
• Protein GI: 209809643
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1280] Putative threonine efflux protein

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.325897
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATACCG CTATTTTATG GGCTTTTATC CCAACCTTCT TTTTTGTTTC TGTTACCCCA 
GGAATGTGCA TGACATTAGC ACTTAGCTTA GGCATGAGTA TCGGCTATAA ACGCACATTA 
TGGATGATGA TGGGAGAACT AGTAGGCGTA GCCGTTGTTG CTGTCGCTGC TGTTTTAGGT 
GTTGCTGCAA TTATGCTCAA CTACCCTTGG TTATTTACTA TTTTTAAAGC CATTGGAGCC 
ACCTATCTTG CTTATATTGG CATTCAAATG TGGCGTTCTA GAGGCAAGTT AGCCATGACA 
GGCAAACAAG CTGAAGCACC AAAAGGAAAA GATTGGGATT TAGTCGTACA AGGTTTTGTT 
ACTGCCATTG CAAACCCTAA AGGTTGGGCT TTTATGGTGT CATTACTGCC TCCTTTTATT 
GATGGAAGCA ATGCTATTGC CCCTCAGTTA ATTGCGTTAG TCTCTATCAT CTTAATTTGT 
GAATTTTTAT GCATGACTTT GTATGCGGTA GGAGGCAAAG GCCTTAAACG TGTTTTAGGT 
CATTCAAATA ACGTAAAAAT CATGAACCGC ATTTCAGGCA CATTAATGAT AGGTGTCGCT 
ATTTGGTTAT TCATGGGCTA A 

 

Protein sequence

MNTAILWAFI PTFFFVSVTP GMCMTLALSL GMSIGYKRTL WMMMGELVGV AVVAVAAVLG 
VAAIMLNYPW LFTIFKAIGA TYLAYIGIQM WRSRGKLAMT GKQAEAPKGK DWDLVVQGFV 
TAIANPKGWA FMVSLLPPFI DGSNAIAPQL IALVSIILIC EFLCMTLYAV GGKGLKRVLG 
HSNNVKIMNR ISGTLMIGVA IWLFMG