| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0882 |
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| Symbol | |
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| ID | 6962219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 967109 |
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| End bp | 967981 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643382150 |
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| Product | HTH-type transcriptional activator, LysR-family |
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| Protein accession | YP_002265181 |
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| Protein GI | 209809642 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.070631 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTGGA TAGAAAGTGT TAGAAGCTAT ATAAAAGTGG TTGAAGAAGG CAGCTTCAAT
GCCGCGGCTT TTCAATTGAA CACCTCAGGA TCCGCTATTA GTAAACGTAT CAACTGGTTA
GAAGATCGTG TTGGTGTTCA GTTACTTACT CGTACTACCC GTTCTGTTCA TCAGACCGAA
GCGGGGATCT TATTTTATCA ACGAGCTCGA TTGCAGTTAG ATCAGTGGCA ACACTTAGTT
GATGAAACAA AAGCCATTAA TCAAACGCCA ACGGGCTTAT TAAGAATCGG CGCCACGTTA
ACTGTTGGCT CTAAATTCAT TATTAAATAC TTAGATGATT TTTTAACGAC TTATCCAAAA
ATAAAAGTCC AACTGATTAC CACACTACCA GGCCAGATCC CTGATACTAA TGTTGATGTC
TTTATTAGTC GAGAATTAGA ACAACTAAAT ACCTTTAGCT ATAAACATAC CCCACTTTTT
CAGCATCATT CTGAATTCTT TGCTTCTAAA GCCTATATTG AAAAAAATGG TACCCCAGAG
AACCTAGATG ATCTTAACAA TCACAACATA CTTATTTGGG GGGAAAGACC CGTTAGAGAA
ATCAAACTGT CAGACGGTAA GCGAATTCGA TTAAGAGGCA ACTTTGCGAC AACCAATCCA
GACGCTTTGT TTCATGCAGC TAAACGTGGT ATGGGTATTT TATTTGCGAG TAGACAAATG
CTTATTGAAG ATATAAACCT AGGTGAACTT ATCCCTATCC TTCCTGGCTA TACCGCCGAT
CACATCTCAG TTAATGCCTA TTACCCTGCG CTCACGTATG AACATACGCG AACTCAGTTA
TTCATAAAAT ATTTAAAAAA CAAACTAAGT TGA
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| Protein sequence | MDWIESVRSY IKVVEEGSFN AAAFQLNTSG SAISKRINWL EDRVGVQLLT RTTRSVHQTE
AGILFYQRAR LQLDQWQHLV DETKAINQTP TGLLRIGATL TVGSKFIIKY LDDFLTTYPK
IKVQLITTLP GQIPDTNVDV FISRELEQLN TFSYKHTPLF QHHSEFFASK AYIEKNGTPE
NLDDLNNHNI LIWGERPVRE IKLSDGKRIR LRGNFATTNP DALFHAAKRG MGILFASRQM
LIEDINLGEL IPILPGYTAD HISVNAYYPA LTYEHTRTQL FIKYLKNKLS
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