Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0805 |
Symbol | |
ID | 6962154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | - |
Start bp | 880910 |
End bp | 881518 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643382072 |
Product | hypothetical protein |
Protein accession | YP_002265111 |
Protein GI | 209809572 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGATGTTA GTGATAATGA TGGCTATGCC ATCAGTGGCA TCGCCCCTGA AGGCTCAGAG TTCAGCATGA TGTACTGGGT TAAAACTGAT GCGATTACCC TTCAATTATC AGGCAGCAGT GATAGTTCAA CTTATGGGCG CAGTTATTTA GGCGTTAGTA GGTATGGCCG AGAATATATG CATTACGGAG GAGGCTATTC CAAAAGCAGC TCAGAGCCTA AGCCAATAAA AGTAGGCGAA TGGAGTCATC TTGGGATGAC GCATAATGCC GAGGGCTCCC AAGTTTATAT TAATGGAGAA TTGATGTTTT CTCGAAATTA TGACAATAAG TATAAACGCT CAGGATTGGC ATTATGGATA GGGGCGCTGA ATAAACAATA CCTAGCAACC GATTTATTCT CAGGGCAAAT AACTGATGTG CAAGTGTGGA ATAGAGGGTT AACTCAAAAA GAAGTTCGTC AGTATATGGC AGAAATGCCA AATGGAACTG AACTTGATTT GCAAGCCGCG TATGACTTTA ATCGCTGGCG TGGTGATTGG GTATACAACA AAGTATCAGG CCAATATGAT TTGAAATTAG TGAATGGTGC CTATTTGAAG AAAAGATAA
|
Protein sequence | MDVSDNDGYA ISGIAPEGSE FSMMYWVKTD AITLQLSGSS DSSTYGRSYL GVSRYGREYM HYGGGYSKSS SEPKPIKVGE WSHLGMTHNA EGSQVYINGE LMFSRNYDNK YKRSGLALWI GALNKQYLAT DLFSGQITDV QVWNRGLTQK EVRQYMAEMP NGTELDLQAA YDFNRWRGDW VYNKVSGQYD LKLVNGAYLK KR
|
| |