Gene VSAL_II0771 details

Gene Information

• Locus tag: VSAL_II0771
• ID: 6962128
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011313
• Strand: -
• Start bp: 847404
• End bp: 849389
• Gene Length: 1986 bp
• Protein Length: 661 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 643382040
• Product: methyl-accepting chemotaxis protein
• Protein accession: YP_002265079
• Protein GI: 209809540
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGCAAA AGTTACTAAG TAATCTAAAA ACAAAATATC AAATTTTAGT TCCAGTATTA 
GTGACTATCA TTGTCATGAT GGTAGCCATT TTTTTAGTTA ACGCTAAATT AGAATCAACA 
AACCATAACG TACAAGTTTC CGAATATAGA AGTACCCAAC TAAGCAATAT CTCAGTCGCA 
GAATCACGTT TACTTTTTTT AAGGTTGAGT GTTGCTGCAA CTTTTACTGA TCTTGAATTA 
TTAAAAACCA TTGATTTTGA TAATGTGGTT TCTGAATTGC GCTTAAACTT TACAAGCATG 
GTAGAGCAAC AAAGAATATT GCAAGATCTC GGCGCAACCG TTAAGACACC AGAACAACTT 
CAGAGAGAAG TCGGTGACAT ACTGTCTCAG CTTGAAGGTT ATAAAGAATT AGCAAATAGT 
ATTATTTTTT ATAATGACAC TAAAGTGAAA GAGTGGGGGA ACTCTATTTA CTTAACAACG 
CCAATTCAAC AAGCGAATGA ATTGATGTTG GCGGCCACAC TCAGTGAAGA AGAGCAAGCA 
TATTGGACCA AAGTACTTCT TGAGCTTTAC AATAGCGCAG GCAGTATTGA AATACATATG 
ACGTCACTCT TTAATGAAGA CTTATTTACT TCAATCAGTA AAATGGCAAG AATTGATATT 
GTAAATGACC AATTTTCAAC ACTATTTAAA TTGATTGAGC CTTTAAAAAA CACAGAAGCA 
AAAAATATCA TGTCTTCTGT ATTTAAATCT CAATCAGACA TGAATTTGGT GCTGTGGAAT 
GCGACCAACA ACATTGAGCA AAGCAAAAAG AGTTTGGTTG ATCTTGGTGG CGTAATGTAT 
CGAGAATTAA GTGACGAAAG AGAACGTTTG TCTTTAATGA ACCAAAAAAT ATCATCAACG 
AATATGAAGT TAATTTCTGA AAGTCAGAAT TTATTATTTG TTGCAATGCT AATTACAGTG 
GTTGTATCGT TAATTATTGG GATGATTATT GCTCATATCG TTACAAAACC AATCTTGATT 
CTTCAAGAGC AAATGTCAGA CATTTCTAAT GGTCGATTAG ATTCATTAAA TCATCAATCA 
AATAATAATG AGATTGGTGA ATTATGTAAG AATACGGATA GCACAGTTAT TCGTCTTCAA 
GAAATGATCA GTAGCTTACG TAATGTTGGG GAAGAAGTCT CTTCGTCATC GACAGAACTT 
GCCGCTATCA TGGTACAAAG TGAAGCGAAT GCCTCAGATC AAAAATCACA AGTCGATTTA 
ATCGCTACGG CTATTACTGA ACTTGCGGCG TCGGCAAACC AAGTGGATGA ATCTGCGAAT 
CAAGCGGACA TGAAAGCAAG AGAAGTACTT ATCATGAGCC GTGATGGGGC TAAATCAGCG 
TCAGAAGGGG TAAAGTTAAG CCAAGACCTT GCGAACCAAA TGGACGGCAC ATCAAGCGAA 
GTGATGATTC TTAAAGATCA AACTGATCGT ATTAGTGAAG TGATTACGGT TATTGATTCA 
ATCTCAGAGC AAACGAATTT ACTGGCACTG AATGCCGCCA TTGAGGCTGC TCGTGCGGGT 
GAAAGCGGAA GAGGCTTTGC GGTTGTTGCT GATGAGGTTC GAGTGCTTGC CGCTAAAACT 
CAACAATCAA CACAAAACAT CCAAAACATT ATTAATGACT TACAACAAAA GTCATTAAAC 
GTGGTTGATT CCGTAAATCA GTCAATAGAG ATGATTCACC AAACTGCCCA GATGAGTATT 
GATACGAATA ATCAGTTATT AAATATTTCT GATTCTATCG AGATGATATC GCAAACAAAC 
TCTGAGATGG CAACCGCCGC CAATGAGCAA AATAGAGCGA TTGAATCCAT CAGTGAAAAC 
GTCAATGTGA TTACTGAAAG TATTAATCAA AATGTTGAAG GCATTAAAGA GTCAACTCAA 
GCTAGCCAAC ATTTATCTGA ATTATCTGAA AACCAAAGAG AGCAGTTAAC GTTCTTTAAA 
TTATAA 

 

Protein sequence

MLQKLLSNLK TKYQILVPVL VTIIVMMVAI FLVNAKLEST NHNVQVSEYR STQLSNISVA 
ESRLLFLRLS VAATFTDLEL LKTIDFDNVV SELRLNFTSM VEQQRILQDL GATVKTPEQL 
QREVGDILSQ LEGYKELANS IIFYNDTKVK EWGNSIYLTT PIQQANELML AATLSEEEQA 
YWTKVLLELY NSAGSIEIHM TSLFNEDLFT SISKMARIDI VNDQFSTLFK LIEPLKNTEA 
KNIMSSVFKS QSDMNLVLWN ATNNIEQSKK SLVDLGGVMY RELSDERERL SLMNQKISST 
NMKLISESQN LLFVAMLITV VVSLIIGMII AHIVTKPILI LQEQMSDISN GRLDSLNHQS 
NNNEIGELCK NTDSTVIRLQ EMISSLRNVG EEVSSSSTEL AAIMVQSEAN ASDQKSQVDL 
IATAITELAA SANQVDESAN QADMKAREVL IMSRDGAKSA SEGVKLSQDL ANQMDGTSSE 
VMILKDQTDR ISEVITVIDS ISEQTNLLAL NAAIEAARAG ESGRGFAVVA DEVRVLAAKT 
QQSTQNIQNI INDLQQKSLN VVDSVNQSIE MIHQTAQMSI DTNNQLLNIS DSIEMISQTN 
SEMATAANEQ NRAIESISEN VNVITESINQ NVEGIKESTQ ASQHLSELSE NQREQLTFFK 
L