| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0737 |
|---|
| Symbol | |
|---|
| ID | 6962097 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011313 |
|---|
| Strand | + |
|---|
| Start bp | 813171 |
|---|
| End bp | 813695 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643382011 |
|---|
| Product | membrane protein |
|---|
| Protein accession | YP_002265049 |
|---|
| Protein GI | 209809511 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3216] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAGAA AATTTATCAA ACGTTTTTTA CCAAACCATG AAACCATTAA GCGCCAAAAA
GCATTAAAAA TATTTGGTAA TGTTTTATAT AACCCCAATT TATGGTGTTT AAATCGTCGC
TCTGCTGCTG GCGCTTTTGC TGTTGGACTA TTTATGGCCT TTGTTCCTCT TCCTAGTCAA
ATGATTATGG CAGCAGGACT CGCTATTATA TGCAGTGTAA ATTTACCACT CTCGATCGCA
TTAGTTTGGG TAAGTAATCC AGTGACCATG CCAGTATTAT TCTATGGCGC GTATAAAATT
GGCGCATGGT TACTATCTAC TCCTCCACAA AACTTTCATT TCGAACTGTC TTGGGAGTTT
ATTGGGTCAC AAATGTCAAC AATAGGCCCT CCATTCCTAT TAGGTTGTGC TGTGTGTGCC
ATATTATCTT CGTTAATCGG CTACTTTGGT ATTCGTGGTC TGTGGCGTTA TTCTGTCGTT
CGTAGCTGGA ACAAACGTAC TCGACGCTTA AATATTAATC GTTAG
|
|---|
| Protein sequence | MPRKFIKRFL PNHETIKRQK ALKIFGNVLY NPNLWCLNRR SAAGAFAVGL FMAFVPLPSQ
MIMAAGLAII CSVNLPLSIA LVWVSNPVTM PVLFYGAYKI GAWLLSTPPQ NFHFELSWEF
IGSQMSTIGP PFLLGCAVCA ILSSLIGYFG IRGLWRYSVV RSWNKRTRRL NINR
|
|---|
| |