Gene VSAL_II0650 details

Gene Information

• Locus tag: VSAL_II0650
• ID: 6962037
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011313
• Strand: -
• Start bp: 699392
• End bp: 699997
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 643381930
• Product: transcriptional regulator, response regulator
• Protein accession: YP_002264968
• Protein GI: 209809430
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGTCAGTT TAGAAGAAGC TGGGTATAAC TGTATACATT CTGATAATGC AACGGATGTA 
TCAAGTTTTT GGGCAGAGGC CGATATCGTT ATTCTTGATC GCCAGTTACC AGAAGGTGAT 
TCTTTAACTT GGTTACCTGA ATGGAAACAA ATTAAAGACA TACCAGTGAT TTTACTCACT 
GCGCTTGTTT CAATAAGAGA TAAAGTGACG GGTCTTGATT CAGGTGCAAA TGATTACTTA 
ACAAAACCTT TTGCAGAGGC TGAGTTACTT GCTCGTTTAC GTGCACATTT ACGCTCTCCT 
GAATCAGAAG CTGAAAATAA AACGCAGTTG GTTGTTGGTG TACTTTCAAT CGATACGTCA 
ACGCGCGATG TCATTAATGG TAGTGACGCG GTAACGTTAA CACGCACTGA ATTTGATCTA 
TTATTATTCT TAGCATCCAA CTTAGGTAAA GTGTTTACGC GTGATGAGTT GTTAGACCAA 
GTGTGGGGCT ATAATCATTT CCCTACAACT CGTACGGTTG ATACGCATAT CCTCCAACTT 
CGTCAAAAAA TTGTAGGGAT TGAAATTGAA ACCCTGCGTG GTGTTGGTTA CAAAATGAAA 
GCGTAA 

 

Protein sequence

MVSLEEAGYN CIHSDNATDV SSFWAEADIV ILDRQLPEGD SLTWLPEWKQ IKDIPVILLT 
ALVSIRDKVT GLDSGANDYL TKPFAEAELL ARLRAHLRSP ESEAENKTQL VVGVLSIDTS 
TRDVINGSDA VTLTRTEFDL LLFLASNLGK VFTRDELLDQ VWGYNHFPTT RTVDTHILQL 
RQKIVGIEIE TLRGVGYKMK A