Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0539 |
Symbol | |
ID | 6961944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | + |
Start bp | 600422 |
End bp | 600817 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643381827 |
Product | hypothetical protein, putative phage gene |
Protein accession | YP_002264865 |
Protein GI | 209809327 |
COG category | [S] Function unknown |
COG ID | [COG4453] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGCGT TATATTCACA AAGCTTAAAA ATTAAATCCG TATTAGTTCC GTACAAGTTG CGCTTTGGTT GTTTAAATCT TATACTCAGG TTAATTACGG AATTACTCCG TACGATTGGA GGTTTTATGG CTACTGCAAG ACTTGATATC CGTTTGGATG AAGAAATCAA AGCTAAGGCT GAGAAAGCTT CAGCTTTACT TGGTTTAAAA AGCTTAACTG AATACGTTGT TCGTTTAATG GACGAAGATT CAACTCAGGT GATTTCTGAA TATGAAAGCA TCACTGTTGA AGCAAATGTA TTTGACCAAT TCATGATTGC TTGTGACGAG GCTAAAGCTC CGAATAAAGC ATTACTTGGA GCTGCTGCAT TTACTAAAAG TGGTGAGTTT AAGTGA
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Protein sequence | MQALYSQSLK IKSVLVPYKL RFGCLNLILR LITELLRTIG GFMATARLDI RLDEEIKAKA EKASALLGLK SLTEYVVRLM DEDSTQVISE YESITVEANV FDQFMIACDE AKAPNKALLG AAAFTKSGEF K
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