Gene VSAL_II0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_II0539 
Symbol 
ID6961944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011313 
Strand
Start bp600422 
End bp600817 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content37% 
IMG OID643381827 
Producthypothetical protein, putative phage gene 
Protein accessionYP_002264865 
Protein GI209809327 
COG category[S] Function unknown 
COG ID[COG4453] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGCGT TATATTCACA AAGCTTAAAA ATTAAATCCG TATTAGTTCC GTACAAGTTG 
CGCTTTGGTT GTTTAAATCT TATACTCAGG TTAATTACGG AATTACTCCG TACGATTGGA
GGTTTTATGG CTACTGCAAG ACTTGATATC CGTTTGGATG AAGAAATCAA AGCTAAGGCT
GAGAAAGCTT CAGCTTTACT TGGTTTAAAA AGCTTAACTG AATACGTTGT TCGTTTAATG
GACGAAGATT CAACTCAGGT GATTTCTGAA TATGAAAGCA TCACTGTTGA AGCAAATGTA
TTTGACCAAT TCATGATTGC TTGTGACGAG GCTAAAGCTC CGAATAAAGC ATTACTTGGA
GCTGCTGCAT TTACTAAAAG TGGTGAGTTT AAGTGA
 
Protein sequence
MQALYSQSLK IKSVLVPYKL RFGCLNLILR LITELLRTIG GFMATARLDI RLDEEIKAKA 
EKASALLGLK SLTEYVVRLM DEDSTQVISE YESITVEANV FDQFMIACDE AKAPNKALLG
AAAFTKSGEF K