| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0375 |
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| Symbol | tadD |
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| ID | 6962592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 417098 |
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| End bp | 417841 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 643381672 |
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| Product | putative secretion system protein |
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| Protein accession | YP_002264714 |
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| Protein GI | 209809176 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0542373 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAGGAA TTATGCTATT AAGTCTTGCT GGTTGTGTGA CTCAATCAAG CATTGATACT
GAAATTGCAA AAGAAACGAT CTTAGTCAAT ACGAAAAATC ACGCTGAATT AATTGTTTTT
TATAAGAATC AATTGAAACA AAAAGAAAAC CAACAGGTTC GAGAGAAGTT AGCTCAAGTA
TATCTAGATT CAAGCGATCC CGAATCCGCT TTATTTACCA TTGCATCGTT GAATAACGAT
TCTCGCTCGA TTCACTCTTT TTTAATTGAA GCAAATGCAC AGCTAGAATC GGGCATGGTA
GAAGACGCAT TGGAGACTGC AAATAAAACG TATTTGCTCG ATGACAATAA TGCAGAGATA
GAAAACTTAT TGGGTGTTAT TTATGCAGCG AAGCGAGATC TCCCTCAAGC AAGGCATTAT
TTTAATTTGG CGAGAAAACA TTTATACAGT GATATAAAAA TTAAGAACAA TTTAGCGGTA
CTCGATATTC TTGAGGGCAA GTATGACAAA GCGAATGATC GCTTATTGCA TCTGTATCTG
AATGATAAAA ATGACGCTTT AGTTCAATCG AATTTAATGT TAGCGATGGC TAAATCTGGG
GATTTGGATT TTATGGAAAA AGTGCTTTCT CCTAAGTACA CAAAACGTCA AATATCGGAT
CGCTATATTG CGTTAAGAAA GACAGAGCTT CAAAGAAATA AAGTCACACC GACCGGAGTC
AAAAATAACG ATGAGAATCA ATAA
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| Protein sequence | MAGIMLLSLA GCVTQSSIDT EIAKETILVN TKNHAELIVF YKNQLKQKEN QQVREKLAQV
YLDSSDPESA LFTIASLNND SRSIHSFLIE ANAQLESGMV EDALETANKT YLLDDNNAEI
ENLLGVIYAA KRDLPQARHY FNLARKHLYS DIKIKNNLAV LDILEGKYDK ANDRLLHLYL
NDKNDALVQS NLMLAMAKSG DLDFMEKVLS PKYTKRQISD RYIALRKTEL QRNKVTPTGV
KNNDENQ
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