| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0373 |
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| Symbol | tadB |
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| ID | 6962590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 415304 |
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| End bp | 416215 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643381670 |
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| Product | type II secretion system protein F |
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| Protein accession | YP_002264712 |
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| Protein GI | 209809174 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.232118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTTATG GGATCTCTTT AATTTTTGGT GGGTTATTAG TGCTGTATTT GATGTCTACT
TATAGTGGTA GGCATCGTGA TCATCTTAAT CATGCTTCAA TTTCACCCTC TGATAATGAT
CGCCAAGCGG TTAAACTCGT TTCTTTGTCT GATGCAGATA TCAGTAAAAG GCTAGTGCGT
TTTTTTAAAA ATACGTATCA ACAAATCGAT TCTCTAGCCA ATGTGAAAAT TTCGCTCTAT
TGCGTTCTGA TGGCGTTACT TGGTATTTAT ATTAATCAAA CGTTCATTCA CGGTAATTTC
TTTATTGTAG TAGTGATTGT TGAAGTTGTA GGCGTGTTTG GTGCGATATT ATGGCTAGGT
AAGCGAGAGA AAAATAGATT TGAAGATTCT TTTCCTGATG CTTTAAACAT GCTTTCAAGT
GCCGTGAGTT CAGGTGAAGG GATCATGCAC GCGATTATAT TCGTAGGGGC CTCTCTCGAT
GGCAAAGTAG GGAAAGAATT TAAACGTATG GGAGAGCAAT TACAATTAGG TGAATCTCCC
GATACGGTGT TCAGAAAATC GTGTGCTCGT TTTCCATACC CTTCCTTTCA ATTCTTTATC
ATTACGTTAC GTACAAGTAT GGAGCGAGGA GGGCAGTTAA AAGAGATAAT GAGGCGTCTT
AATCGCTTAA TGTTTGGTGC GCGTTCCATT GAAAAAAAGA AGTATGCATT AACGTCGGAA
GCTCGAACGT CAGCAAAAAT TGTAGCTTCA ATTCCTTTTA TCTTTTTGTT TATGTTGCAA
TACCTAAGCC CAGAGAACTA TGAATATGTA ATGTTTAATC CCGATGGTCG ACCTATTTTA
TATTACGTAT TAATTAGTGA ATCGATAGGG ATATTAACTA TATGGTTATT AATGAAAGGG
GTGCGCTCAT GA
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| Protein sequence | MIYGISLIFG GLLVLYLMST YSGRHRDHLN HASISPSDND RQAVKLVSLS DADISKRLVR
FFKNTYQQID SLANVKISLY CVLMALLGIY INQTFIHGNF FIVVVIVEVV GVFGAILWLG
KREKNRFEDS FPDALNMLSS AVSSGEGIMH AIIFVGASLD GKVGKEFKRM GEQLQLGESP
DTVFRKSCAR FPYPSFQFFI ITLRTSMERG GQLKEIMRRL NRLMFGARSI EKKKYALTSE
ARTSAKIVAS IPFIFLFMLQ YLSPENYEYV MFNPDGRPIL YYVLISESIG ILTIWLLMKG
VRS
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