| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0372 |
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| Symbol | tadA |
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| ID | 6962598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 414021 |
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| End bp | 415307 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643381669 |
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| Product | type II/IV secretion system protein, ATP binding domain |
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| Protein accession | YP_002264711 |
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| Protein GI | 209809173 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00402347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCAGA ATAAATTAAT TTATATCGAA ATTCGTAATC AGATCTTTGA AGCATTAGAA
GCTGAAGCGG TTAACTCTTT ATCTAAAGAG CAGTTAAGTA AGCAACTCAG TGGGGCGATT
GATTTGCTGA TCGAACGTCG AGAGTGGTCA GTGAGTACCA TGATCCGTGC CGAATTTGTA
ACTAGCCTTG TGGATGAACT GCAAGGGCTT GGACCATTAC AGGTGCTAAT GGAAGATGAT
TCCATCAGTG ACATTATGAT TAATGGTCAT AATCAAATAT TCATTGAGCG TAATGGATTA
GTCGAAGTTG CTCCAGTCAG TTTTATTGAT GAAGAACAAC TTATACATAT TGCTAAACGC
ATTGCATCTC AAGTGGGTCG TCGTGTTGAT GATTCTTCAC CCACGTGTGA CGCCCGCTTA
CAAGATGGCA GTAGAGTTAA TATAGTGATA CCTCCAATTG CTATTGATGG CACATCAATG
TCAATTAGTA AGTTTAAAAA AGACAGTATT GGATTGGACA AACTGACTGA ATTTGGGGCG
CTTAGTCCAG AAATGGCTCA GATCCTTATG ATCGCCTCGC GCTGTCGTCT GAATATCTTA
ATTTCTGGTG GTACAGGCTC AGGTAAAACC ACCATGCTGA ATGCGCTTTC TCAATTTATA
TCGGAAAAAG AACGCATTAT TACTATTGAA GATGCCGCGG AATTAAAATT ACTTCAACCC
CATGTGGTGC GATTAGAAAC TAGAAATTCA GGAATTGAAG GCACTGGCGC AATCACTCAG
CGTGATCTTG TGATCAATGC GTTACGTATG CGACCAGATC GTATTGTTGT CGGTGAGTGT
CGTGGTGGTG AGGCCTTTGA GATGCTTCAG GCAATGAATA CGGGTCATGA TGGTTCAATG
TCTACATTGC ATGCGAATAC GCCACGAGAT GCAATGGCGC GTGTTGAAGC GATGGTGATG
ATGGCAAGCA ATAATCTGCC CTTAGAAGCA ATTCGCCGTA CGATCGTAAG TGCAGTTGAT
TTAGTTATTC AAATCAGTCG ACTGCACGAT GGTAGCCGAA AAGTCATGAG TATCACTGAA
GTTGTTGGCC TTGAGGGAAA CAATGTTGTG TTAGAAGAGT TGTATAAATT TCATTCTTCA
GGACAGCATG GGAGTGATGG GAAGATACTG GGTCAGTATT CAACCGCGGG TTTAATGCAG
CGTTCTGTAT TGGTAGAGAA AGCGCGATTC TTTGGTTTAG AGCAACAATT AAATGCGGCG
TTTAATAAGG TGGATGAGAC AGCATGA
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| Protein sequence | MNQNKLIYIE IRNQIFEALE AEAVNSLSKE QLSKQLSGAI DLLIERREWS VSTMIRAEFV
TSLVDELQGL GPLQVLMEDD SISDIMINGH NQIFIERNGL VEVAPVSFID EEQLIHIAKR
IASQVGRRVD DSSPTCDARL QDGSRVNIVI PPIAIDGTSM SISKFKKDSI GLDKLTEFGA
LSPEMAQILM IASRCRLNIL ISGGTGSGKT TMLNALSQFI SEKERIITIE DAAELKLLQP
HVVRLETRNS GIEGTGAITQ RDLVINALRM RPDRIVVGEC RGGEAFEMLQ AMNTGHDGSM
STLHANTPRD AMARVEAMVM MASNNLPLEA IRRTIVSAVD LVIQISRLHD GSRKVMSITE
VVGLEGNNVV LEELYKFHSS GQHGSDGKIL GQYSTAGLMQ RSVLVEKARF FGLEQQLNAA
FNKVDETA
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