| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0360 |
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| Symbol | |
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| ID | 6961814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 404127 |
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| End bp | 405032 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643381657 |
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| Product | HTH-type transcriptional regulator, LysR-family |
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| Protein accession | YP_002264699 |
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| Protein GI | 209809161 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.132599 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCACAATA AAGATCTCAA TTTACTTAAG CTGCTTATCA TTCTAAATGA AGAAAGACAA
ACTATATTGG CGGCAAAGCG AATGAATTTA AGCCAACCAA CCATCAGTAT TATGCTCAAG
AAATTACGGG ACCAATTTGA TGACCCCTTA TTTATTCGTG ATAAAAACAA CCTAATACCC
ACGGTAAAAT GCGCTCATAT ACTATCAACC CTACCTGATA TTTTGACGCA GATTGATGTC
TTATATCGTG ATAATACAGA GTGGGATATC TCTCAGCTCG ACGGCGAGTT GCACCTCTTA
CTCTCTCCAC CACTCATATC AACATTAGGC ACTCAATTAG TTAAGCAATT AACGTTATTG
GCTCCTGATC TTACAGTTCA ATGCTCTCAT TGGAGTATAA ATACCCCAAA AAAACTTGAG
ATCAACTCTC ACCAGCACTT TGGTATTACT TATTTACCGA TGGAGACCAA CAAAACATTA
ATGGAGCAAG AAGTTGGCGG TGATACCTTT GCCTTTGTGG TTCGTCACGA TCACCCAATG
ACAGAAGCTA CCGTTGAAAA CCTTATTCCT TATCCTATCT CGATTTGTAT TATCCCGGGA
GTGACAGGCC CCTCTAAAGC GGAGCAGTTG ATTCGTCATT TTAAATTGAA GAAGAAAATT
AATTTAAGAA CCAGCGATGT TGCTTTAATG ACCAACTTAA TGAAAGAAAG TGAGTATGTC
GGCATCATGC CACGATCTCT TCAAAACTCG ATCGGTGATG ATTTTCGTTT CTTAGCGATT
CCTCACGAAT TTGTGCCGGA AGATTATCAA CGTAAAATTG CTTTTTTCTG TCACCAAAAA
AATAGAAAAC AACCCCTTAC GGAATGGCTA ATAAAAGAAA CCAAGCGAAT ATTAAATACT
CTTTAA
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| Protein sequence | MHNKDLNLLK LLIILNEERQ TILAAKRMNL SQPTISIMLK KLRDQFDDPL FIRDKNNLIP
TVKCAHILST LPDILTQIDV LYRDNTEWDI SQLDGELHLL LSPPLISTLG TQLVKQLTLL
APDLTVQCSH WSINTPKKLE INSHQHFGIT YLPMETNKTL MEQEVGGDTF AFVVRHDHPM
TEATVENLIP YPISICIIPG VTGPSKAEQL IRHFKLKKKI NLRTSDVALM TNLMKESEYV
GIMPRSLQNS IGDDFRFLAI PHEFVPEDYQ RKIAFFCHQK NRKQPLTEWL IKETKRILNT
L
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