Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0300 |
Symbol | |
ID | 6961757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | - |
Start bp | 333848 |
End bp | 334603 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643381601 |
Product | hypothetical protein |
Protein accession | YP_002264643 |
Protein GI | 209809105 |
COG category | [R] General function prediction only |
COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.246063 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCACAT TATCTGTTTA TCGATTCAAA CAATGGTTAA AAGAAGGTGA AAGCCCACTT GCATCTCGCT TATTTAGAGT GGCCAAATCC ATTCGTTACT TCGAACTGCC TACCCCTCGT CTCATTAACG TTCTTTTTTA TGGCGTGCAC AAAACCATCA CAACTCAATG GCAGGCATTA ACTCACCTCA TTTTTTATGT GCCGGCGTTT AAAGGACGTT TACATAAACA TGGGAAAAGA ACTCTATTGT ATGGCGGTCT TCCTTTTTTT AGTGGCCCTC TGACGATGAC CATTGGTGAT GATTGTCGGA TTTCAGGACA AACCACGTTT AGCGGCCGCA CTGACTCACC AAACCCCACT CTAACGGTAG GGAACAATGT CGATATATGC TGGCAAACCA CAATTGCTGT CGGCAATAAA ATAGTGATTG CCGATAATGT TCGTATCGCA GGGCAAGGCT TTCTGTGTGG TTACCCAGGC CACCCTATCG ACCCAACAGA ACGCGCTTTA GGGAAAGCGG ATTTAGACAG CCAAGTGGGC GATATTATTT TAGAAAAAGA CGTATGGTTG GGATCTCGCG TTAGTATCAT TGGCAATGTC ACTGTCGGTG AAGGCACCAT TGTCGCCTCA GGCAGTGTCG TAACCAAAAG CTTACCGCCC TTTGTATTAG CCGGTGGAAA CCCAGCCAAA GTCATCAAGC CGTTAGACAT TACAAGCTCA AAAACAATCA AAGAGGACAT TCGTTATGAA GCATGA
|
Protein sequence | MSTLSVYRFK QWLKEGESPL ASRLFRVAKS IRYFELPTPR LINVLFYGVH KTITTQWQAL THLIFYVPAF KGRLHKHGKR TLLYGGLPFF SGPLTMTIGD DCRISGQTTF SGRTDSPNPT LTVGNNVDIC WQTTIAVGNK IVIADNVRIA GQGFLCGYPG HPIDPTERAL GKADLDSQVG DIILEKDVWL GSRVSIIGNV TVGEGTIVAS GSVVTKSLPP FVLAGGNPAK VIKPLDITSS KTIKEDIRYE A
|
| |