| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0266 |
|---|
| Symbol | |
|---|
| ID | 6961728 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011313 |
|---|
| Strand | - |
|---|
| Start bp | 293742 |
|---|
| End bp | 294731 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643381571 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002264613 |
|---|
| Protein GI | 209809075 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.488249 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCATT TTTCGTCAGC ATTTATAACC GGAGCAGGAG GCTTTATCGG TCGACATTTA
GTTGAGCGAT TGCTTAAAAA TAACGTCACT ATCACGGCCC TAATGATGGA AGGTGAAGCC
ATACCAAGCC TATGGAATAA CAAGGTCAAT ATTGTTACTG GTGACGTAAG ACACTTATTA
CGAATGAAAG ACAACCTACA ACCTTGTGAT GTTATTTTCC ATTTAGCCGC TGTTGTCGGT
GATTGGGGAG CACAGCAAGA TCACATTGAC GTAACGGTAA ATGGAACAGA ACAAGCCATT
GAATTAGCCT TATTATGGCA ATCTCACTTT ATCGTCACAA CGAGCGTTTG TGCCTATGCT
AGCCAATTAG CGAAAGGAAA ACTCAATGAA CAAAGTCTGC TTGGTACCCC AAGTTCTCCT
TATGAATTCT GTAAGCAAGA ACAAGAACGA GTGACTAAAA ACGGGGTTAA AAAAGGATTA
AAAGCCTCCA TCATTCGTCC TGCCAATGTC TTTGGAGTGG GAAGCGGCCC TTGGGTAAAT
ACGTTATTGG ATATGATGCG TAACAACAAA CCTTGCATGA TAGGCTCTGG AGAATGGGAT
GCTGGGTTAG TTCATGTTAA CAATCTCATT TCTATTCTTA TTGCCGTCGC GAATTCAACA
TATACCAACG GTGATATTTA TCTTGCGGCA GATGGCTTTG GAGTCACATG GAAAGAATAC
ATGACTCGTC TTGCACTCGT TGCTGATGTG CCACCACCTA AAAATATTCC ACTGCCCTTA
GCTCGAATTC TTGCCCCTAC CTTAGAATTT ATCGGTCATA TTACTCAACA GAAAACGCGC
CCTTTAATAA CTCGTCAATC TTTTCGTTTA ATGGGAGGAG CCAATGAGTT TTCAATAAAA
AAAGCACAAA AAGAACTCGA TTACTCTCCA TTCATTACTT TTGATCAGGC AATGAATGAA
TTAAAAAACC ACTTTTCAAA ACAGAAATAG
|
|---|
| Protein sequence | MNHFSSAFIT GAGGFIGRHL VERLLKNNVT ITALMMEGEA IPSLWNNKVN IVTGDVRHLL
RMKDNLQPCD VIFHLAAVVG DWGAQQDHID VTVNGTEQAI ELALLWQSHF IVTTSVCAYA
SQLAKGKLNE QSLLGTPSSP YEFCKQEQER VTKNGVKKGL KASIIRPANV FGVGSGPWVN
TLLDMMRNNK PCMIGSGEWD AGLVHVNNLI SILIAVANST YTNGDIYLAA DGFGVTWKEY
MTRLALVADV PPPKNIPLPL ARILAPTLEF IGHITQQKTR PLITRQSFRL MGGANEFSIK
KAQKELDYSP FITFDQAMNE LKNHFSKQK
|
|---|
| |