| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0246 |
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| Symbol | |
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| ID | 6961710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 271060 |
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| End bp | 271356 |
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| Gene Length | 297 bp |
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| Protein Length | 98 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643381553 |
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| Product | nitrite reductase [NAD(P)H] small subunit |
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| Protein accession | YP_002264595 |
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| Protein GI | 209809057 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
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| TIGRFAM ID | [TIGR02378] nitrite reductase [NAD(P)H], small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.507833 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGACCCCAC AATTAGGGGC ATGTGCTAAA GTGCTCAACC ATCAAGTGGC AGTGTTTTAT
TGCAAGCGAA GTGAGCGTTT ATATGCACTA TCAAATTATG ATCCTATTGG GAAAGCCAAT
GTAATATCGA GAGGAATGAT GGGCTCTCTA GAAGGCGAAC CTTATATATC GTCACCACTT
TACAAGCATC ATTTTCATTT AGAAACAGGG GTTTGCATTG AATTCCCCGA AGTGATATTA
ACGACTTATC CTGTGCGTAT GTCAGATAAT CAAATACAAA TTAAACTGGC TCATTAA
|
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| Protein sequence | MTPQLGACAK VLNHQVAVFY CKRSERLYAL SNYDPIGKAN VISRGMMGSL EGEPYISSPL
YKHHFHLETG VCIEFPEVIL TTYPVRMSDN QIQIKLAH
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