Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0230 |
Symbol | |
ID | 6961696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | - |
Start bp | 252511 |
End bp | 253752 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643381539 |
Product | serine/threonine transporter SstT |
Protein accession | YP_002264581 |
Protein GI | 209809043 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3633] Na+/serine symporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACCAG CACAACCCCT ACTCGTTCGA ATGATGAATA CTAACATCGT TCTTCAGATA CTCGTCGGTA TTATTGCCGG TGTTGCTCTT GCTGTACTTG CTCCAGATCT TGCTGTTTCT GCCGGTCTTT TTGGTCAATT ATTTGTTAGT GCGCTAAAAG CAGTTGCACC AATTCTTGTC TTTATTCTAG TAGCATCATC GATTGCAAAT CAGAAACGTG GACAAGACTC AAATATGAAG CCTGTGGTTG TTTTGTATTT AGTCGGTACC TTTTGTGCTT CATTAACCGC TGTAGCAATG AGTTTTATTT TTCCAACGAC TCTCTCTCTT GTTACTGATG CGGCAACGAA CAGTGCACCA GAAGGCATAA TGGAAGTTCT ACATACACTT CTATTCAAAA TTATTGATAA CCCAATTAAT GCGTTAATGA CGGGCAACTT CATTGGTATC TTAGGTTGGG CAATCGCTTT AGGCTTAGGT CTTCACTCTG CTTCTGATGC AACAAAGAAA GTATTCATTG ACCTTTCAAA CTGTATATCA AGCATTGTAA CGGTCGTTAT TCGTTTTGCA CCTATCGGTA TCTTTGGTTT GGTTTCTAGC ACATTTGCAG AAACAGGCTT TGATGCATTA GCAGGTTACT CTCACCTACT GGCGGTTCTA CTTGGTTCAA TGGCATTTAT CGCATTAGTC GTTAATCCAT TAATCGTATT TATCCGCACA AAACGTAATC CTTACCCATT GGTATTTTTA TGCTTACGTG AAAGTGGTGT AACCGCATTC TTCACTCGTA GTTCAGCAGC AAACATCCCA GTAAACATGG CATTATGTGA GCGTTTAAAC CTACATAAAG ATACCTATTC AGTATCGATT CCACTAGGTG CAACAATTAA CATGGCTGGT GCCGCGATTA CCATTACCGT TCTTACGCTA GCAGCGGTTC ATACGGTTGG TGTTCAGGTT GATTTACCTA CGGCATTACT GCTTAGTTTA GTGGCTGCGG TTTCGGCGTG TGGTGCTTCT GGTGTTGCTG GTGGTTCATT ATTACTTATC CCATTAGCAT GTAGCTTATT TGGTATCCCT AACGAAATTG CAATGCAAGT GGTTGCTGTT GGTTTCATCA TCGGTGTAGT TCAAGATTCA GCTGAAACCG CCCTAAACAG CTCGACAGAC GTTCTTTTCA CTACAGCAGC ATGTCGCACT GCAGAAAACC CATACAAACC TCTAATACAA GAAACAAACT AA
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Protein sequence | MSPAQPLLVR MMNTNIVLQI LVGIIAGVAL AVLAPDLAVS AGLFGQLFVS ALKAVAPILV FILVASSIAN QKRGQDSNMK PVVVLYLVGT FCASLTAVAM SFIFPTTLSL VTDAATNSAP EGIMEVLHTL LFKIIDNPIN ALMTGNFIGI LGWAIALGLG LHSASDATKK VFIDLSNCIS SIVTVVIRFA PIGIFGLVSS TFAETGFDAL AGYSHLLAVL LGSMAFIALV VNPLIVFIRT KRNPYPLVFL CLRESGVTAF FTRSSAANIP VNMALCERLN LHKDTYSVSI PLGATINMAG AAITITVLTL AAVHTVGVQV DLPTALLLSL VAAVSACGAS GVAGGSLLLI PLACSLFGIP NEIAMQVVAV GFIIGVVQDS AETALNSSTD VLFTTAACRT AENPYKPLIQ ETN
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