| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0181 |
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| Symbol | |
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| ID | 6961652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 207607 |
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| End bp | 208383 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643381499 |
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| Product | ABC-type glycine betaine transport system,substrate binding domain |
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| Protein accession | YP_002264541 |
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| Protein GI | 209809003 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATA AAATAACCCT CGGGGTCACT AATCTTTCTT TTCATCAGTT AACCGCATCG
ATAATTACTC ATGTATTAGT TGATATGGGA TTCGAAGTAG ATCGAATTTA CTCCTCACAT
CAAGACAACT TTGAGAAATT AAAATTAGGC GACATTGATA TGCTGGCTTC TGCTTGGCTT
CCCTCTAGTC ACGGTATATA TAAATCTGAT GTAGAAGAGA CGGTAGAGTT ACTTGAATTA
GGGCTGCATT ATAAGCCATA CGCACTCTGG GGCGTACCAG ATTACATCCC AGAAGAATCC
GTATCTGAAA TAAATGATTT ATTAAAACCT GAAGTGCTTT CATGCATGAA TAAAAACATT
CAAGGCATTA ACCCAGGTGC TGGTATTACT CGATTTTCTA TCAAAATGAT GGATGCATAC
GACTTAAGTC ATGCAGGTTA CATCTTCCAT ACAGGAAGTG AAGAAGATTG CTTTGCCGCA
TTCGAACAAG CCGTTGAGAA TAAAGAATGG GTTATCGTTC CATTATGGAA GCCACAATTT
TTACACCATA AATACACTAT TCGTGAAATT TCCGAGCCAA AAGGTTTATT AGGTATCGTC
GATCGCGCCG TGTTATTACT CCGACAAGAT CGCGCAACTT ATTTCACTCA AGAACAAATT
CGAAGATTAG ATTCACTTAC ATTCTCCAAT GAGATTATCG CGGCTCTCGA CTATCAAGTT
TCCCGAGAAG GAAAAGATAT CGATGAAGTA ACCAAGCAAT GGCTTAATAA TCAGTAA
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| Protein sequence | MKNKITLGVT NLSFHQLTAS IITHVLVDMG FEVDRIYSSH QDNFEKLKLG DIDMLASAWL
PSSHGIYKSD VEETVELLEL GLHYKPYALW GVPDYIPEES VSEINDLLKP EVLSCMNKNI
QGINPGAGIT RFSIKMMDAY DLSHAGYIFH TGSEEDCFAA FEQAVENKEW VIVPLWKPQF
LHHKYTIREI SEPKGLLGIV DRAVLLLRQD RATYFTQEQI RRLDSLTFSN EIIAALDYQV
SREGKDIDEV TKQWLNNQ
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