| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0160 |
|---|
| Symbol | cyoD |
|---|
| ID | 6962451 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011313 |
|---|
| Strand | - |
|---|
| Start bp | 187066 |
|---|
| End bp | 187395 |
|---|
| Gene Length | 330 bp |
|---|
| Protein Length | 109 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 643381479 |
|---|
| Product | cytochrome o ubiquinol oxidase subunit CyoD |
|---|
| Protein accession | YP_002264521 |
|---|
| Protein GI | 209808983 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3125] Heme/copper-type cytochrome/quinol oxidase, subunit 4 |
|---|
| TIGRFAM ID | [TIGR02847] cytochrome o ubiquinol oxidase subunit IV |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAATC AATTTGTATC GGGCAGTGAT CAGCAAGATT TAGGGGCAAA AGGTTATATT
ACTGGTTTTA TTGCTTCTCT TATCTTAACT ATGATCCCAT TTTACTTTGC CTACACTGGG
GTTTTATCTC GTGAGGTGAC TATTGTTGTT TTGATTCTCT CAGCAATAGC ACAGTTAGTG
GTACATTTAT TTTATTTCCT TCATATGGAT AGCACAGAAA AAGGGCGCTT TAATATGCTG
TCTTTTGTGT TTACTGCCGT TATTGTGTTT ATTGTGATTG CAGGTTCTAT TTGGATCATG
TGGAACCTTA ATAACAATAT GATGATGTAG
|
|---|
| Protein sequence | MANQFVSGSD QQDLGAKGYI TGFIASLILT MIPFYFAYTG VLSREVTIVV LILSAIAQLV
VHLFYFLHMD STEKGRFNML SFVFTAVIVF IVIAGSIWIM WNLNNNMMM
|
|---|
| |