| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0103 |
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| Symbol | |
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| ID | 6961585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 127079 |
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| End bp | 127834 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643381428 |
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| Product | HTH-type transcriptional regulator, DeoR-family |
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| Protein accession | YP_002264470 |
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| Protein GI | 209808932 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCCAG CAGAACGTCA GAGAACCATT TTATCGTTGT TATCACACCA AGAAGTCATC
AGTATTGTTG AGTTGATTGA ACACCTCGAT GTATCACACA TGACTATACG TCGTGACATT
GTCAAACTTG AATCGTTAGG AAAAGTGATT TCAGTATCCG GTGGGGTTCA GTTAACAAGA
ACCATTCATA GCGAGCTATC GCATGACAGT AAAATAGAAC AGCAAACCAA TGAGAAAGCA
GTAATTGGTA CTATTGCCGC TGATTTAATT CCACCAAATT CAACGGTATA CCTAGATGCA
GGTACCACCT CTTTAGAGCT TGCTCATAAA ATATCCGCGC GCGATGATTT ACTTATTATT
ACGAACGATT TCGCTATTGC TGCCTATCTC ATTAACCACA GTGAATGTGA GATTTATCAT
ACTGGTGGAA AGATTGATCG AAATAACCAA TCAGCAATAG GCAGAAAGGT TGTGGAGTTT
CTGCTCACTA TGAATATTGA TATTGCTTTT ATTTCTACCT CATCGTGGAG CCTAAAAGGA
TTATCAACCC CCTATGAAGG AAAGGTTGAC GTTAAGCAAG CCATCGCAAA ATCATCACAA
ATCACTTATT TAATTTCTGA TTCAACGAAA TACGGTCAAG TAGCCACTTT TCATGCATTA
GATATCGAAT GCATTCATGG GGTGATTACT GATAATAACT TAGCTGAAAG TGTGGTTAAT
GATCTCGAAG AAAAAGGCAT TAACGTTATT CGTTAA
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| Protein sequence | MIPAERQRTI LSLLSHQEVI SIVELIEHLD VSHMTIRRDI VKLESLGKVI SVSGGVQLTR
TIHSELSHDS KIEQQTNEKA VIGTIAADLI PPNSTVYLDA GTTSLELAHK ISARDDLLII
TNDFAIAAYL INHSECEIYH TGGKIDRNNQ SAIGRKVVEF LLTMNIDIAF ISTSSWSLKG
LSTPYEGKVD VKQAIAKSSQ ITYLISDSTK YGQVATFHAL DIECIHGVIT DNNLAESVVN
DLEEKGINVI R
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