Gene VSAL_II0066 details

Gene Information

• Locus tag: VSAL_II0066
• ID: 6961553
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011313
• Strand: +
• Start bp: 93524
• End bp: 94282
• Gene Length: 759 bp
• Protein Length: 252 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 643381395
• Product: membrane protein
• Protein accession: YP_002264437
• Protein GI: 209808899

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.416482
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCAAAC ACACCAAGAA ACTGCAAATT TTCCTTATGT TCCTTATTGC CTGTCTTTTT 
ATTAGTGGTA TGACCCTACT TTCTTTAAGC TCATCGATTA ATAATAAGAA CGAAACAATT 
CAACGCCTAA CGGATGACCT CATTGCTGAA CAATTACTAT CAAGCTCATT AACAGATTAC 
GACAACGTCA TTATTGAACT GCAATCAAAG AATGACACCC TTCGCCGTGA TTTAAGTATC 
ACAAGTGAAA CCTTAGTTGA GAAAAACTTA ACCATTAATC AGCTTAAAGA ACAACTGGCG 
ACCGAGCGAC GTAAATTAGC TCGCTATAAA TCAAGCTACA ATAAAAACCT GAAATCACGT 
TTAGCTAACG AAAAGAAAAA ACTAAATACT CAATTAGACA AAGAGCGAGT AGCCTTACAA 
TCTCAAGAGA ATGAGCTTGA ACAACAGCGT GTAGAGCTAG AGAAATTAAA AAATACCCCA 
CCACCAGAAA AAACAGTCAC CGCCGCAGAT CAAAAGGCGA TTGACGAAGA GCGAGTAGAA 
GAATTAATGA AAAAATTCGA TGCTTACCAA GTTGATTTAA GTGTTGAAAA CCAATGTGAT 
AAAGACTATC TATACCGTTA TAACGAAGCA AAAAGCACCT TAAGCCACAT CAGAACGTAT 
TTACAGAAAA ACCAAATGGA TTCGAATTAT TATCATTTTG TCATTGCCAA TGACACCTCG 
ATTACAGCGC AAAACCGTAA ACTGTGCTTA GGTGATTAA 

 

Protein sequence

MIKHTKKLQI FLMFLIACLF ISGMTLLSLS SSINNKNETI QRLTDDLIAE QLLSSSLTDY 
DNVIIELQSK NDTLRRDLSI TSETLVEKNL TINQLKEQLA TERRKLARYK SSYNKNLKSR 
LANEKKKLNT QLDKERVALQ SQENELEQQR VELEKLKNTP PPEKTVTAAD QKAIDEERVE 
ELMKKFDAYQ VDLSVENQCD KDYLYRYNEA KSTLSHIRTY LQKNQMDSNY YHFVIANDTS 
ITAQNRKLCL GD