Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0053 |
Symbol | |
ID | 6961540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | - |
Start bp | 68853 |
End bp | 71309 |
Gene Length | 2457 bp |
Protein Length | 818 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 643381382 |
Product | membrane associated response regulator,histidine kinase |
Protein accession | YP_002264424 |
Protein GI | 209808886 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.255701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGTT TAGCTTCTTT TTCAATTCAA TTGCTATTAC AGACCGCTGG GGCAGTAATC ACGGCGCTTT TATTATTGTA TTTCTATATG AATGTTCAGT TCCATGAGCA CGAAGAGCGA CTCACTGAGC TGCAACTCGA AATTAAATTA GCTAAAAATG ACATGTTAAT GTTGCGTCGT AATGAAAAAG ATTTTATGAG TAGAAATGAA ATCAAATATC ACGATCGTCT AGAAGTAGGA ATTAAAAGCT TTAAAGGCAA ACTCATTAAT ATTCATCGAG TATTAGTGGT TGAGGGGATA GATATTAACT CTGACAGCTT AGGCTTAATT CAATCAATTG ATGAATACGG GCATTCTTTC CATGAGTTAA GTGAGTTATT AGAGGCGCTT AATGGAAAGA ACGGAGATAA AGGACTATTT GAAAATCTGA AAGATGAATC TATCCAATTA GAAAGAGATT TATTGGTACT TCATAATGTT GAATTGAATC AAATGATGTT GGTGCTACAA GAGAAGATTT ATGATTTTTA TTCTGGAATA TCAGGAAAAG AAGAAGCGGC TGTTTTGTTT GATCTTGAAC AGATTTTTCT ATTGCTTAAT GTTATGGAAG AAGAAGTGGC CCGTTTTGAT AATGAAACGG TAAATGATAC TTACCTGATT TTTAAAAATA GCTTTATTAA TATTCAAAAA CTGCACAGCA TTGCTGGTTA TAATTATCGT TTAGGGCTGT ATGGAGAAAT ACGAGCGACT ATCCATGATG TAGAAGAACG CCTTAATGTA CTGTTTGATA CAGTATCTGT AAAAGCGACA AATAAAATTG AGCGTTTCTT CTTTTATAGC CAAGTGCTTT CAGTGGTTAT TTTCTTACTT ATTGTTAGTG TACTTATTGC TGTTGTCGTG ATGACTTCTC GTTTAGAAAA GCGAATCTTG CGTTCACAGA ATCAAGAGAT AAAAGCTAAC AAAGCTAAAA GTTCATTTCT TGCCAATATG TCTCATGAGA TCCGAACTCC ACTTAATGGG ATTATTGGGA TGACTGAAAT ATTATCAGTA TCCACATTAA CGGCCATTCA AAAAGATTAC TTAGCGACTA TCAATGCTTC ATCCCAAACC TTATTAATGC TCATTAATGA CGTGCTTGAT CTATCTAAAA TCGAATCAGG AAATATAGAA GTAAATACAC ATAGTTGTAA GATTAAAGAA GTTATTTTTG ATACTGCGGC ATTGATTGCC CCGAAAGCAC AGCAAAAAGG GGTTAACATT AAAATTATCA TGAGTGAAAA TTTTCCCACT TATGTAAAAG CCGATGAGCA AAAAATCAGA CAAGTACTCA TGAATTTAGC TTCTAATGCG ATTAAATTTA CAGAGGCTGG CTCTATCTCT TTTGAATTGT CATTAATTGA AGAAACAGAC ACGTCTTATC GTTATTTCTT TTCTGTAAAA GATACTGGTC TAGGGATTGA AGAGAGTAAA CATGAGCAGG TGTTTGAAGA ATTTAAGCAA GAAGACGATG ATACATCAAA GAACTACGGA GGGACTGGAT TAGGTTTGGC TATTTCGTCG AAAATGATCA AAATGATGGG CAATGAAATT AAGTTAAAAT CCAGTAAAGG GGTTGGTAGT GAGTTTTATT TTTCACTTGA ATTAGATAAA GATCATACTC CAGAGAAGGC ATCAAAAAGT AGAAAAAATA AAACCATTAT TTATTGTTCA AAATCACCCA AGGAGTTGTT CATTAACGAA GTGAGCGGGT ATGGGTATCA TGTTGAGAAA GTGTATTCCA TTGAAGAGAT TAAAGTTCAA GAAACTTCAG ATTCTTTGGT TGTGCTAGAA AAAGAAGATT TCCAAGACAA AATTGATGTC GTTAAAGAAA AGTACCCAAG ATTGCCTATC ATACTTGTTC GGAATAACAC CGATAACAAT GCAGAAGTAG ACAGTGTGAG TGGTTATGTG ACGTATCCAT TATTAGGTTC TCGTTTAGAT AATTTGCTGC ATTCTGTTTT TGAGCATTCA CATGAAAATG AAACTACAGA GGTTGAAGCA AAAGAAGGGG AAATCGAGCG TGGCAATGGT ATGGTTCTTA TCGTAGAAGA TAACAAGATT AATCAGCAAG TTGTCTCGAT TAACCTTAAA ATGTTGGGCA TAGAATATAA AATTGCGAAC AATGGTGCAG AAGCGGTTGA ATTATATAAA AGACATCATG AAGAGATTCT CGTGGTATTA ATGGATTGCA TGATGCCGGT TATGGATGGT TTTGAAGCAA CAAAAGCGAT TCGACAGCTA GAAAAAAATG AAGATATAAC GCTTACGACG ATTATTGCGC TTACGGCCTC TATATTGGAC GATGACATTC AGAAATGTTT TGATAGTGGT ATGGATGATT ATTTACCGAA ACCATTCAGA AGAGAGATCC TCCAAGAAAA AATAGCGAAA CTTCAGTTAA TCTATAAAAA ACGATGA
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Protein sequence | MKRLASFSIQ LLLQTAGAVI TALLLLYFYM NVQFHEHEER LTELQLEIKL AKNDMLMLRR NEKDFMSRNE IKYHDRLEVG IKSFKGKLIN IHRVLVVEGI DINSDSLGLI QSIDEYGHSF HELSELLEAL NGKNGDKGLF ENLKDESIQL ERDLLVLHNV ELNQMMLVLQ EKIYDFYSGI SGKEEAAVLF DLEQIFLLLN VMEEEVARFD NETVNDTYLI FKNSFINIQK LHSIAGYNYR LGLYGEIRAT IHDVEERLNV LFDTVSVKAT NKIERFFFYS QVLSVVIFLL IVSVLIAVVV MTSRLEKRIL RSQNQEIKAN KAKSSFLANM SHEIRTPLNG IIGMTEILSV STLTAIQKDY LATINASSQT LLMLINDVLD LSKIESGNIE VNTHSCKIKE VIFDTAALIA PKAQQKGVNI KIIMSENFPT YVKADEQKIR QVLMNLASNA IKFTEAGSIS FELSLIEETD TSYRYFFSVK DTGLGIEESK HEQVFEEFKQ EDDDTSKNYG GTGLGLAISS KMIKMMGNEI KLKSSKGVGS EFYFSLELDK DHTPEKASKS RKNKTIIYCS KSPKELFINE VSGYGYHVEK VYSIEEIKVQ ETSDSLVVLE KEDFQDKIDV VKEKYPRLPI ILVRNNTDNN AEVDSVSGYV TYPLLGSRLD NLLHSVFEHS HENETTEVEA KEGEIERGNG MVLIVEDNKI NQQVVSINLK MLGIEYKIAN NGAEAVELYK RHHEEILVVL MDCMMPVMDG FEATKAIRQL EKNEDITLTT IIALTASILD DDIQKCFDSG MDDYLPKPFR REILQEKIAK LQLIYKKR
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