| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2925 |
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| Symbol | epsC |
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| ID | 6988446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 3168486 |
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| End bp | 3169397 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643381204 |
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| Product | general secretion pathway protein C |
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| Protein accession | YP_002264254 |
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| Protein GI | 209696323 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3031] Type II secretory pathway, component PulC |
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| TIGRFAM ID | [TIGR01713] general secretion pathway protein C |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTAACAA ATATGAAAAT CGATAAATTC CCTCAATATT GGTTAATCTA TCAATCGACT
ATTTCAAAAG GATTAACGGT TATCTTAGTT GCCTGGTTTG CATGGATTTG TGGATCATTA
TTTTGGGCAA TGTTGTCACC GCAGACGTCG GTTTCAAAAT GGTCTCCTTC AACGGTTGCA
GCGCATTCTT CAAAGCCGAA AACATCGACA GACTCATTAT CTGAATTGCT TAATAGCCAA
GTCTTTGGGC GTTATAGCGA AGAGGCTAAA AAGTCAGAAC AACCTAAGAT TACTGAGGTC
AAAGATGCGC CTAAAACGCA GTTAAATTTG ACGCTAGCAG GCATTGTGGC GAGCAGTAAC
CCTAAATTTA GTCTTGCTGT TATTGCTAAT CGCGGACAGC AAAATACCTA TGGAATTGAA
GAAACAATTG ATGGTACACG AGCAACGGTA AAGGCGATTA GCCCTGATCG TATCATTATT
TCAAATAATG GTCGTGATGA AACGCTAATG CTTGAAGGGC TTGAGTACAC CAAAATCTCG
ACAGAAAAAA ATCACACCGG TAGCTCAGGC ACTGTGATCG GAAATAACCG TCAAAATTCA
AATCAAGATG AATTAGAACA AATTCGTAAG GAAATGGCTC AAAACCCACA ATCAGTGCTG
AAGTACATTC GTCTTTCTCA AGTGAGTAAT GATGGAAAAA TTGAAGGGTA TCGAGTGAAT
CCAGGTAAAG ACAGAAAACT GTTTGATTCT GTTGGTTTAA AGCCTGGAGA CATTGCAACC
AGTTTAAATG GGATTGATTT AACCGATCCT GCGGCAATGA GTTCATTGTG GAAAAACATG
TCAGAAATGA CGGAATTAAA TTTAACGGTT CAGCGTGATG GACAGTTACA TGACATCTTT
ATCGGTCTAT AA
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| Protein sequence | MVTNMKIDKF PQYWLIYQST ISKGLTVILV AWFAWICGSL FWAMLSPQTS VSKWSPSTVA
AHSSKPKTST DSLSELLNSQ VFGRYSEEAK KSEQPKITEV KDAPKTQLNL TLAGIVASSN
PKFSLAVIAN RGQQNTYGIE ETIDGTRATV KAISPDRIII SNNGRDETLM LEGLEYTKIS
TEKNHTGSSG TVIGNNRQNS NQDELEQIRK EMAQNPQSVL KYIRLSQVSN DGKIEGYRVN
PGKDRKLFDS VGLKPGDIAT SLNGIDLTDP AAMSSLWKNM SEMTELNLTV QRDGQLHDIF
IGL
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