Gene VSAL_I2720 details

Gene Information

• Locus tag: VSAL_I2720
• Symbol: pilQ
• ID: 6988983
• Type: misc_feature
• Is gene spliced: No
• Is pseudo gene: Yes
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 2945408
• End bp: 2948136
• Gene Length: 2729 bp
• GC content: 39%

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGCAAG GATGCAGAGG TAACATGAAT ACTGGAGCAA TGAGATGGTG CGCTTTTCTT 
GTACTGTTTT TTGTTCATAT TCATGCATTT GCTGAAGAGT CGCTTGAGAA TCAACTCGTT 
TCTGTCGATT TTCAATTAAG TAAGCAAAAA GGAGGGCAGA TAACCGTCGA ACTTGCTTCT 
GCTGCCGCTA CGGTAGATTT ACGTAAAGAG AACGGTAAGT TAGTGATCGA GCTTCATGAC 
ACTAAAGTGA ATGATGATAA ATTGGTCATT TTGGATGTCG AAGATTTTGC GACGTTGGTG 
TCTCGTATTG AGACATTTAG AGAGCCTAAG AGTACGTTGC TTTTTGTTGA TATTAAGGGG 
GATTATGATT ATGACTATTC TCTTAAAGGG CCTTTTTTAG AAGTGATAGT GTCTGCTCCT 
GTTGTTGTAG CAGCGCAGAA AGAAGCGACG AAAGTTAAAG AAGAGAGTAA ACCTATCTCA 
ATCAACTTCC AAGATATCCC CGTACGCCAT GTATTGCAGT TGATCGCTGA TTATAACGAC 
TTTAATTTAG TGGTTGCTGA TTCAGTGAAA GGCAATTTGA CATTGCGTCT CGATGGTGTT 
CCATGGCAGC AGGTTCTCGA TATTATTTTG AAAGTAAAAG GATTAGATAA GCGAGTTGAA 
GGTAATGTGG TTTTGATCGC ACCTAAGGCC GAGCTCGATG CACAAGAGAA GCAAGTGTTA 
GAGCAAGCTC AGATGGCGTC AGAGTTAAGT GCATTGTCCT CTGAAATTCT GTCGATTAAA 
TACGCTAAGG CCTCTGAAAT TGCTGATTTA TTGGTAGGCG AAGGTGATAT AACCATGTTA 
TCGAGCCGAG GTAGTATTAC GGTCGATGAA AGAACGAACT CCTTATTATT AAGAGACTTA 
TCAGAAAATA TAATGGTAAT AAAATACATT ATTGAATCAT TAGATATTCC GGTTAAGCAG 
GTGCAAATAG AAGCCCGAAT TGTTACCGTT AATGAAGGAA ATCTTGATGA GTTAGGGGTT 
CGCTGGGGAT TCTCAAATAC CAACGGAAGT GCAACGGCAG GAGGTTCGAT TGAAAGTAAT 
TTGGCTGCTG TGGGTTTATA TGATGGTGGA AAAGATGGGT TGCCCGTAGA TGATTTTTTA 
AATGTGAATT TAGGGCTATC AAATCCAGCA GCATCAAGTA TTGCTTTTCA AGTGGCGAAA 
CTCGGTTCAA ACTTATTACT GGATCTTGAA CTTTCCGCGC TTCAATCGGA ATCAAAAGCG 
GAGATTATTT CGAGTCCTCG CTTAATTACG ACGAATAAAA AGCCCGCTTA TATCGAACAA 
GGGACTGAAA TTCCTTATTT AACCTGAATT CTGGATAAAA CATGCTTTAA GCGAGGATTA 
GTTCAAATTC ACATTCTGAT AGCTTAATTC GTGGCTTTTG TTTTTTTAAA CAATAAGCCA 
CAACGCCTGA AATTACATTT AGCATGAAAC CAGTCACGCT ACGATGACGG CTATGTTCAA 
TTTGAGAGAT ATTCTTCAAT TGGTCATTTA TCGTTTCGAT AATGTATCTC TTTGATAACA 
TAGCCTTATC AAAAGCACTT ATCTCTTTTG CTTTCATGTT TTTTCGCGAG GTAGTCACTA 
AATCGACATC AGAGTTCTTT AAGCTCTCAC TCAACTTTTT ACCTATGTAC CCTTTATCAG 
CGTACAATTT CCCCGAGAGT TCTTTGCATA AATCAGGTAC AGGAGTCCTA TCATTTACAT 
TGCCAGCTGT GATTTTCAGC GAAATAATTT CTCCAAGATG GTTAATCAAT AAATGAAGTT 
TGAAGCCGAA AAACCATCCC ATGGTACCTT TTCCTCTTTT CGCAACACCA TCAAAGACTT 
TATGGCGAGG AATTCGAATG TTATGGCATA CTTTAAGACT CGTGGAGTCA ACAAAAGCAA 
TGCCAGTCGG CTTACCTTTG ATAGATTGAA AATAGGCACA CATTGGGGCG ATTAGGCTAG 
GCATTTTGCT CACAAATCGA GTGTGGCTAA GTAAATTTGG AAAGTATCCT TTCCAATATT 
GATGAACTAA CCCGATATAG AAGTTCTTGA AATCTCTATG ATTTGATTGA TGAAAAGCGA 
TGACAATAGT CATACATTCA CTAGTAGACA TTACTGACTG ACGTTTTCTT TTTCTCTCAC 
TAGCCTCAAC AAGGTATTTT TCCCATTGAG ATAAGAATTG ATAACAAAAA TCATCGACAT 
CACAAAATAT ATCAACTAAT TTATTCATCT TGCCCACCTT TTAAAATACG TTCAAATAAT 
TCTTGGTCGA AAGATCTGAT CGTTAGGTGG GCAATTAGTT CAGCCTTATC CAGAATTCAG 
GTTATTTAGA GTCGTCATCG AGCGGTGCAA CAACCGTTGC CTTTAAAAAA GCGGTATTAA 
GTTTAATGGT TACACCACAG ATAACGCCGG ATAATCGATT GGTTCTTGAT TTGATTGTGA 
CGCAAGATAG ACCCGGTCAA ATTGTGAAAA CGGGGACAGG TGAAGCGGTC GCAATTGAAA 
CACAAAGAAT AGGGACTCAA GTTTTAGTGG ATAATGGCGA AACTGTTGTT TTGGGTGGTA 
TTTATCAGCA TTCCTTATCA AATAGTGTAG AAAAAGTACC CCTTCTGGGT GATTTACCCC 
TACTTGGAGT GCTATTTCGT CGCAGCTCCG AAAATATAGG TAAAAAAGAA TTATTAATCT 
TTGTCACACA AAAAGTTGTT ATACAATAG 

 

Protein sequence