| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2654 |
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| Symbol | |
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| ID | 6987858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2873413 |
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| End bp | 2875224 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643380924 |
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| Product | putative lipoprotein LppC |
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| Protein accession | YP_002263992 |
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| Protein GI | 209696062 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3107] Putative lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAATA TGACCTTTAG AAAGAACAGT GTAACACGCC TTGTTGCTCC TGTAGCCTTA
GCGCTAACAT TAGCCGCGTG TTCAAGCTCA CCGACATCCC CTGAGCGTCT TGATATCACT
CAATCGCCAT CAGAAACAAG TTCTGCTTAT ATTCTAAAAG CCGATCAGCA ACAAGGTAAC
TTACAAGCTA ACTTACTTAT CATGGCATTG AAGGCCGCGG TACAAGAACA GAATACAGAG
CTCTCTAAAA ATTTACTTAC GCGTTTAGCT ACGATGGATT TATCCCCAGC TCAAATCGCT
GAGATTCAGT TAATAAAAGC AGAGCAACTG AAGTCACAAA ATAAATACAC TCAAGCGTTG
CAAGAACTAA ATTTTGAAGC TTGGTGGAAA CTAGAAAACT CACAATGGAT TGAGTACTAC
GAGCTTCGTC ATGAACTGTA TTTATTTAAT GGCGACAATC TGAATGCGGC AAGAGAGCTC
ATTCAATTAG AACCTTTTAA AGCTCAAGAT CAAAAAGCGC AATTATGGTC ACAAGTATGG
ACGAATATTT CATCACTAAA TAGCGCAAGC CTTCAAGCAA TACAACTTGA CGAAAAAGAA
AACATTCTTC ATGGCTGGGT CCAATTAGCA ACCTATTCAG ACACACTAAA ACACTCTCCT
GTTCGTTTGC AGCAAGCATT TAAAGACTGG TTACAAGCAA ATCCAATGCA TCCCGCAGCG
ACTTACACTC CACAAGAAGT ATTAGATATA TTAGCATTAG ATATTGTTCG TCCAGAGCAT
GTCGCTTTAC TTCTTCCTTT GACTGGCCGC TTTGGACCAC AAGGTATGCG TGTACGCGAT
GGCTTTATTA ATGCCATGAT GGAAGATAAA GAACGTGACG ATTTCACTAC ATTAAAAATT
ATCGACACTC AAGTAACCCC AATGTCAGAG ATTCTTCCTA TCCTTGATAA AGAGCAAATT
CAATTTGTGG TTGGCCCGCT AATTCGCAGT GAAATTGAAG AGTTTCAGAC CTTAAATTCA
GCAGACATTC CGCAACTCGC GCTTAATATT CCAAGCGAAA TTAATGTTGA TAAAAACAGC
TGCTATTTCA CTCTATCTCC GGAACAAGAA GTAGAGCAAG CAGCCATTCA CTTATTTAAA
CTTGGTCACA AACATCCCCT GTTTCTTGCT CCGCAAGGAA GAATGGGTGA ACGTTTGAAT
CAAGCATTCA GTGATAAATG GTTCCAATTA ACGTCACAAA AACCATCGAC AAGTTACTTT
GGTTCAAAAG CACAGCTACA ACAAAAAGTG AACAGCGTAT TTGGCCTTGA AAGCAGCCAA
GCTCGTATTT ACCAAATGAA CGCCTTAGCT GGTATTGATT TAGAATCTCA ACCACGCAGT
CGTCGTGATA TTGATGCGGT CTATATGATT GCAACCAGTG GTGAATTAAC GCTACTAAAA
CCATTTATTG AAGTGGCGAT TAACCCAGGT ATTACACCGC CTAAATTATA CGCAAGTTCA
CGCAGTAACA ATGGACGTCA AACACAGCTA GCTGAAATTC GTGGTGTTGA ATTCAGTGAC
ATTCCACTAC TGACAAACGA AAACCACAGT TTTAATGTTC AGTTTGAAAA ACTATGGCCT
GACAGCAGTA ATGGTGAAAC TCGACTTCAC GCACTTGGTA TGGATGCTTA CCAACTAATT
ACCGAATTAC CACAGATGAA AGCGGTAGAT AATTATCAAA TGGAAGGTAA AACCGGTGAG
TTAAGCATTA ACCAAGAATG TGTGATTCAA CGAAAAATGA GTTGGGCTAT TCATGGAGAA
GAAACCGAAT AA
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| Protein sequence | MANMTFRKNS VTRLVAPVAL ALTLAACSSS PTSPERLDIT QSPSETSSAY ILKADQQQGN
LQANLLIMAL KAAVQEQNTE LSKNLLTRLA TMDLSPAQIA EIQLIKAEQL KSQNKYTQAL
QELNFEAWWK LENSQWIEYY ELRHELYLFN GDNLNAAREL IQLEPFKAQD QKAQLWSQVW
TNISSLNSAS LQAIQLDEKE NILHGWVQLA TYSDTLKHSP VRLQQAFKDW LQANPMHPAA
TYTPQEVLDI LALDIVRPEH VALLLPLTGR FGPQGMRVRD GFINAMMEDK ERDDFTTLKI
IDTQVTPMSE ILPILDKEQI QFVVGPLIRS EIEEFQTLNS ADIPQLALNI PSEINVDKNS
CYFTLSPEQE VEQAAIHLFK LGHKHPLFLA PQGRMGERLN QAFSDKWFQL TSQKPSTSYF
GSKAQLQQKV NSVFGLESSQ ARIYQMNALA GIDLESQPRS RRDIDAVYMI ATSGELTLLK
PFIEVAINPG ITPPKLYASS RSNNGRQTQL AEIRGVEFSD IPLLTNENHS FNVQFEKLWP
DSSNGETRLH ALGMDAYQLI TELPQMKAVD NYQMEGKTGE LSINQECVIQ RKMSWAIHGE
ETE
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