Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2547 |
Symbol | |
ID | 6988835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 2727812 |
End bp | 2728591 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643380812 |
Product | hypothetical protein |
Protein accession | YP_002263895 |
Protein GI | 209695965 |
COG category | [S] Function unknown |
COG ID | [COG3022] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTATTG TTGTTTCTCC TGCTAAGACC CTTGATTACG AAAGCCCATT GGCAACCGAT TTATCGACAC AACCCGATTT CATTGCTGAT TCGGAAGAAT TAATTCATGT ATGTCGAAAG TTAACGCCTC TTGATATTTC TTCATTAATG AAAGTGAGTG ATAAAATTGC GAGTCTTAAC GCGATTAGAT TTGAAGAGTG GTCTCCTATC TTTACTTCTG ATAATTCTAG ACAAGCGTTA TTTGCTTTTA AAGGCGATGT ATATACCGGG CTTGATGCTG CTAGTTTTAG TGATGATGAT TTTGATTATG CGCAGCGGCA TTTACGCATG CTTTCAGGGC TGTATGGATT ATTAAAGCCA CTTGATCTGA TGCAACCGTA TCGTTTAGAG ATGGGGACTA AATTAGCAAA TGATAGAGGA GCGAATCTTT ATCAATTTTG GGGTAATAAA ATAACAGAAA AGCTAAATGC AGCGATTGAA GAACAGGGTG ATAAGACTCT TATCAATCTA GCATCAAATG AATATTTTAA AGCCGTCAAA CCCGCGTTAT TAAATGCTGA TGTGATCACT CCAATATTTA AAGATTGCAA AAATGGGCAG TATAAAATAA TTAGTTTTTA TGCAAAAAAA GCACGTGGCC TAATGGCTCG TTTTATCATT GAAAATAGAA TTGCAACCAT TGAAGAGTTA AAACGTTTTG CGGTAGATGG TTACTATTTT GTGTCAGCTG AATCATCAGA GAAAGAACTG ATGTTTAAAC GAGAAGAACA GTTCAAATAA
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Protein sequence | MLIVVSPAKT LDYESPLATD LSTQPDFIAD SEELIHVCRK LTPLDISSLM KVSDKIASLN AIRFEEWSPI FTSDNSRQAL FAFKGDVYTG LDAASFSDDD FDYAQRHLRM LSGLYGLLKP LDLMQPYRLE MGTKLANDRG ANLYQFWGNK ITEKLNAAIE EQGDKTLINL ASNEYFKAVK PALLNADVIT PIFKDCKNGQ YKIISFYAKK ARGLMARFII ENRIATIEEL KRFAVDGYYF VSAESSEKEL MFKREEQFK
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