| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2426 |
|---|
| Symbol | tsf |
|---|
| ID | 6989053 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | - |
|---|
| Start bp | 2596349 |
|---|
| End bp | 2597197 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 643380696 |
|---|
| Product | elongation factor Ts |
|---|
| Protein accession | YP_002263780 |
|---|
| Protein GI | 209695850 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0264] Translation elongation factor Ts |
|---|
| TIGRFAM ID | [TIGR00116] translation elongation factor Ts |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00181853 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACTG TAACTGCTGC TCTAGTTAAA GAACTTCGTG AACGTACTGC TGCTGGCATG
ATGGAGTGTA AAAAAGCACT TGTTGAAGCT GAAGGCGACA TCGAATTAGC AATTGAAAAT
ATGCGTAAAT CTGGCGCAGC AAAAGCGGCT AAGAAAGCAG GCAACATCGC TGCTGAAGGG
ACAATCATCA TTAAAGAAGA AGCTGGCGTA GCCGTTCTTC TTGAAGTTAA CTGTCAAACT
GATTTCGTAG CTAAAGATTC TGGTTTCCTA GGATTTGCTA ACGAAGTTGC AGAAGTTGCT
CTAGCAGAAC GTCTAAACGA CATCGTTGCT CTTCAAGCTA AATTTGAAGA TGCTCGTATC
GCTCTAGTTA CTAAAATTGG CGAAAACATC AGCATCCGTC GCGTTCAACT AGTTGAAGGC
GTTGCACTAG CTTCTTACCG TCACGGCGAG AAAATCGGTG TTGTTATTGC TGGTGAAGGC
GATGCTGAAA CACTTAAGCA CATCGCTATG CACGTTGCTG CCTCTAAGCC TGAATACGTT
AACCCATCTG ACGTACCAGC TGACGTTGTA GAAAAAGAAA AAGCAGTTCA AGTAGAAATC
GCTATGAACG AAGGCAAGCC TCAAGAAATC GCAGAGAAAA TGGTTATCGG CCGTATGAAG
AAATTCACAG GCGAAGTTTC TCTAACAGGT CAAGCTTTCA TCATGGAACC TAAGAAAACT
GTTGCTGACA TTCTTAAAGA AAAAGGCGCA TCAGTATCTA ACTTCGTACG TTTAGAAGTT
GGTGAAGGTA TCGAGAAAGC GGCTGAAATG AGCTTTGCTG ACGAAGTAGC AGCAGTACAA
AAAGGTTAA
|
|---|
| Protein sequence | MATVTAALVK ELRERTAAGM MECKKALVEA EGDIELAIEN MRKSGAAKAA KKAGNIAAEG
TIIIKEEAGV AVLLEVNCQT DFVAKDSGFL GFANEVAEVA LAERLNDIVA LQAKFEDARI
ALVTKIGENI SIRRVQLVEG VALASYRHGE KIGVVIAGEG DAETLKHIAM HVAASKPEYV
NPSDVPADVV EKEKAVQVEI AMNEGKPQEI AEKMVIGRMK KFTGEVSLTG QAFIMEPKKT
VADILKEKGA SVSNFVRLEV GEGIEKAAEM SFADEVAAVQ KG
|
|---|
| |