| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2399 |
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| Symbol | rnhA |
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| ID | 6988420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2568848 |
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| End bp | 2569321 |
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| Gene Length | 474 bp |
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| Protein Length | 157 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643380670 |
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| Product | ribonuclease H |
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| Protein accession | YP_002263754 |
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| Protein GI | 209695824 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0328] Ribonuclease HI |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAACAG AGATAATGAA ACAGGTTGAA ATTTTCACAG ATGGCTCTTG CTTAGGCAAT
CCTGGTCCTG GTGGCTATGG TATTGTTATG CGCTATAAAG GCACAGAAAA AACATTTTCA
GGTGGGTTTA ACCAAACCAC AAACAACCGT ATGGAAATGC TTGCTGCTGT CGTCGCCTTA
CGTAACCTTA AAGAACCTTG TATTGTGGTG TTAACGACGG ATAGCCAATA CGTTCGTCAA
GGTATCACTC AATGGATACA TGGTTGGAAA AAACGAGGGT GGAAAAAAGC AGATAAAAAA
CCAGTCGTAA ATGCCGACCT TTGGAAACAA TTAGATGCAG AGGCAGAACG TCACACGGTC
GATTGGCGCT GGGTTAAAGG TCATGCTGGT CATCGTGAGA ATGAAATGTG TGACGATTTA
GCACGTACCG CCGCAGAGAA TCCAACCCAG GACGATACAG GTTACCCAGG CTAA
|
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| Protein sequence | MITEIMKQVE IFTDGSCLGN PGPGGYGIVM RYKGTEKTFS GGFNQTTNNR MEMLAAVVAL
RNLKEPCIVV LTTDSQYVRQ GITQWIHGWK KRGWKKADKK PVVNADLWKQ LDAEAERHTV
DWRWVKGHAG HRENEMCDDL ARTAAENPTQ DDTGYPG
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