Gene VSAL_I2370 details

Gene Information

• Locus tag: VSAL_I2370
• Symbol: narP
• ID: 6988885
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 2543982
• End bp: 2544593
• Gene Length: 612 bp
• Protein Length: 203 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 643380641
• Product: nitrate/nitrite response regulator protein NarP
• Protein accession: YP_002263725
• Protein GI: 209695795
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTGGAATG TTGTTATCGT TGACGATCAT CCTTTAATGC GCCGAGGCAT TGGCCAACTT 
CTTTCTTTTG AAGATGAATT TACCCTAGCA GGAGAAGCAA GTAATGGCAC AGATGCCGTT 
GCTCTAATCT CTAAAGATGA ACCCGACCTT GTTCTTCTCG ATCTCAATAT GAAAGGCATG 
TCAGGCCTTG ATACGTTGCA TGCATTACGC AATGAAGGCG TAACTTGCCC GATTGTTATT 
CTTACCGTAT CCGATAATAA ACAAGACATT AAAACCTTAA TAAAAGCAGG TGCTGACGGT 
TACTTACTTA AAGACAGTGA ACCTGACGAA CTTATTGCAC TGCTAAAGCA AGCAATACAA 
GGTGATAAAG CCTATTCAGA GCAAGTAAAA ATTTGTTTAG AAGAAGGCAA GAATGGTGAT 
GATAAACTGT CTAGTTTAAC CGCTCGTGAA CTTGAAATAT TACAAAATGT AGCGAAAGGA 
ATGAGAAATA AACAAGTAGC AGACAAACTG TTCATTTCAG AAGCAACAGT AAAAGTGCAC 
ATGAAGAGCC TACTTAAAAA ACTCAATGTA AAATCGAGAG TAGCAGCAAC CTTACTTTAT 
TTGGATGCAT AA 

 

Protein sequence

MWNVVIVDDH PLMRRGIGQL LSFEDEFTLA GEASNGTDAV ALISKDEPDL VLLDLNMKGM 
SGLDTLHALR NEGVTCPIVI LTVSDNKQDI KTLIKAGADG YLLKDSEPDE LIALLKQAIQ 
GDKAYSEQVK ICLEEGKNGD DKLSSLTARE LEILQNVAKG MRNKQVADKL FISEATVKVH 
MKSLLKKLNV KSRVAATLLY LDA