| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2297 |
|---|
| Symbol | fliQ |
|---|
| ID | 6988549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | - |
|---|
| Start bp | 2471429 |
|---|
| End bp | 2471698 |
|---|
| Gene Length | 270 bp |
|---|
| Protein Length | 89 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643380575 |
|---|
| Product | flagellar biosynthesis protein FliQ |
|---|
| Protein accession | YP_002263659 |
|---|
| Protein GI | 209695729 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1987] Flagellar biosynthesis pathway, component FliQ |
|---|
| TIGRFAM ID | [TIGR01402] flagellar biosynthetic protein FliQ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCTG AAATGGCCAT TGAGCTATTC CGCGGCGCAC TGTACATGGT GCTTATCATG
GTGTGTGCCA TTATTATTCC AAGCTTATTA ATTGGTTTGG TGGTTGCGGT TTTCCAAGCG
GCAACCTCTA TCAATGAACA AACGTTGAGT TTCTTACCTC GTTTGATCGT GACGCTATTA
TCATTAATGT TATTCGGACA TTGGATGACG AGAATGTTGA TGGAATATTT TTATGAGCTG
ATCGCTCGAA TGCCGACGAT ACTTTATTAA
|
|---|
| Protein sequence | MTPEMAIELF RGALYMVLIM VCAIIIPSLL IGLVVAVFQA ATSINEQTLS FLPRLIVTLL
SLMLFGHWMT RMLMEYFYEL IARMPTILY
|
|---|
| |