Gene VSAL_I2295 details

Gene Information

• Locus tag: VSAL_I2295
• Symbol: flhB
• ID: 6987699
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: -
• Start bp: 2469423
• End bp: 2470553
• Gene Length: 1131 bp
• Protein Length: 376 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 643380573
• Product: flagellar biosynthesis protein FlhB
• Protein accession: YP_002263657
• Protein GI: 209695727
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1377] Flagellar biosynthesis pathway, component FlhB
• TIGRFAM ID: [TIGR00328] flagellar biosynthetic protein FlhB

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGATA GTGACGGTCA AGAACGCACC GAAGACGCCA CGTCCAAACG CTTGCAACAG 
GCCAAAGATA AAGGGCAAGT TGCAAGGTCA AAAGAACTGG CGTCAGTGTC AGTATTAGTC 
TGTGGTGCTA TTTCGTTGAT GTGGTTTGGT GATGAGGTTG GTAAAGCATT GTTATCGATA 
ATGAGTCGCT TCTTTTCTAT TTCTAGAGAA GAAATCTTCG ATACCAATAA ATTACTTGAG 
ATAGTGGGCG GGGCGTTAGT CGCCTTAGTT TTCCCTGTTT TAAAAATTCT GCTTATGTTG 
TTTGTGGCGG CTTTAATTGG AGCAGCAGGC CTTGGTGGGA TCAGCTTTTC TGCCGAAGCC 
GCAATGCCAA AACCGTCTAA AATGAACCCA ATGTCAGGTA TTAAACGTAT GTTTGGTATG 
CAAAGTTGGG TTGAGCTTTT AAAGTCGATC TTAAAAGTAT CGCTTGTTGG TGGCACTGCT 
TTCTATTTGA TCAATAAAAG TAAGGCGGAC TTATTTCAAT TAAGTTTAGA TACGTATCCG 
TCGAATATTT TTCATTCTCT AGATATCCTA TTGAATTTTA TTCTGTTGAT CAGCTGTACT 
TTATTGATTG TTGTTGCGAT TGATATTCCC TTTCAAATTT GGCAACACGC CAATCAATTG 
AAAATGACAA AACAAGAAAT TAAAGATGAA TACAAAGAAA CAGAAGGGAA GCCAGAAGTA 
AAAGGGCGTA TTCGTATGCT GCAACGTGAA ATGACGCAAC GTCGAATGAT GGCTGATGTG 
CCATCGGCGG ATGTTATTGT CACCAACCCT GAGCATTATT CTGTTGCTTT ACGTTATGAT 
CAAACTAAAG ACTCTGCACC GATTGTGGTG GCGAAAGGGG TCGATCATAT CGCAATGAAA 
ATCCGAGAAA TTGCTCGTGA ACATAATATA GATATATTGC CAGCCCCACC TCTTGCGCGA 
GCGTTATATC ACTCAACAGA AGTGGAACAA CAAATCCCTG ATGGTTTATT TGCTGCTGTG 
GCGCAGATAT TGGCTTATAT ATTTCAAATG AAGCAGTATA AAAAGCGCGG TGGAACGAAA 
CCTGAGCTAG ATGATGATTC ACTAACCATC CCAGATGATT TGAAAAAATA A 

 

Protein sequence

MADSDGQERT EDATSKRLQQ AKDKGQVARS KELASVSVLV CGAISLMWFG DEVGKALLSI 
MSRFFSISRE EIFDTNKLLE IVGGALVALV FPVLKILLML FVAALIGAAG LGGISFSAEA 
AMPKPSKMNP MSGIKRMFGM QSWVELLKSI LKVSLVGGTA FYLINKSKAD LFQLSLDTYP 
SNIFHSLDIL LNFILLISCT LLIVVAIDIP FQIWQHANQL KMTKQEIKDE YKETEGKPEV 
KGRIRMLQRE MTQRRMMADV PSADVIVTNP EHYSVALRYD QTKDSAPIVV AKGVDHIAMK 
IREIAREHNI DILPAPPLAR ALYHSTEVEQ QIPDGLFAAV AQILAYIFQM KQYKKRGGTK 
PELDDDSLTI PDDLKK