| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2280 |
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| Symbol | ccmB |
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| ID | 6988307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2454304 |
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| End bp | 2454972 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643380558 |
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| Product | cytochrome c-type biogenesis protein CcmB |
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| Protein accession | YP_002263642 |
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| Protein GI | 209695712 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01190] heme exporter protein CcmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTTCTT CAATGACTAC GATAATAAAA CGTGAATTAT TGATCGCTTT TCGTCGTAAA
GCCGATGTTT TAAACCCATT ATGGTTTTTT ATTATCGTGA TTACCTTATT CCCATTAAGT
ATTGGCCCTG AGCCAACTCT ACTTGCGCGT ATTGCGGCGG GTATTGTTTG GGTTGCTGCT
TTATTGTCTG CCTTACTTTC TCTTGAACGT TTATTCCGAG ACGATTTTTC CGATGGCTCA
TTAGAACAAA TGATGTTAAT GCCAAGCCCA TTGTCGGTTT TAGTATTAGC CAAAGTGTTT
GCTCATTGGG TACTGACTGG CCTGCCGTTG ATTATTATCA GCCCATTACT GGCTATTTTA
TTATCCTTAG ATTTCAATAC ATGGTTAGCC ATTGTACTTA CCCTATTACT TGGAACACCC
ACACTGAGTT TTCTTGGTGC CGTAGGGGTT GCATTAACCG TGGGTCTGCA AAAAGGGGGA
GTGTTGCTAA GCCTTCTTAT ACTCCCACTT TATATACCGG TTCTAATTTT TGCGACATCT
GCAATTGATG CTGCAACTCT AGGGATGGCT TATAATGGCC AACTTGCTAT TTTAGGAGCG
CTTCTTATGG GCTCCGCAAC ATTGACTCCG TTTGCCATTA GTTCGGCACT ACGAGTCAGT
GTGCAATAA
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| Protein sequence | MFSSMTTIIK RELLIAFRRK ADVLNPLWFF IIVITLFPLS IGPEPTLLAR IAAGIVWVAA
LLSALLSLER LFRDDFSDGS LEQMMLMPSP LSVLVLAKVF AHWVLTGLPL IIISPLLAIL
LSLDFNTWLA IVLTLLLGTP TLSFLGAVGV ALTVGLQKGG VLLSLLILPL YIPVLIFATS
AIDAATLGMA YNGQLAILGA LLMGSATLTP FAISSALRVS VQ
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