| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2080 |
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| Symbol | |
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| ID | 6987568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2230843 |
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| End bp | 2231649 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643380367 |
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| Product | HTH-type transcriptional regulator, AraC-family |
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| Protein accession | YP_002263455 |
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| Protein GI | 209695526 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAGTA ACCAGCAGCT ACCTGCTAAT GAAATGATGA AGAACGACCC ACTATTTCCT
GCGTTGGCTA AAGTAATAGA AATGCCTAAA GGCTACGTTG ACTCGCTACA TCATCACACA
TGGCATCAAG TAATATTTCC GATCAAAGGG TTACTCCAAA CTCAAGTTGG ATCTTATCAA
TATTTACTTC CTCATACCTC TGCGCTATTT GTTCCAGCAA CGTTAGCACA TGAATCAATC
GCTTTAACAA ACACCACTTT CATTGGTATA TATATTAACC CTGCGTATTG TTTTAAGTCT
GAAGAACAGG TTCGAACCAT ATCTTTAACT CCATTTATCA AGGAGTTAAT ACAAGAAATC
AGAAGAAAAT GTTTGCAAGT AGAAAGTCAA ACGGCGTTAT TAGGCTTATT ACAAGTACTG
CATGACCAAA TGATGCATAA CGACGTAATA ACTTTTCAGC TACTACTCCC TAAAGATAGA
CGTTTAAAGC AAATATTTGA CAAGTTAACT GAGACACCAG CCTTAGATTG GCCTTTAAAG
ATATGGGGAA ACGAAGTGGG AGCATCAGAA CGAACGCTAT CTAGACTTTT TGTTAAAGAG
TTTAAAACCT CATTTCCACT CTGGCGTCAG CAATTGCGCT TAATATATTC ATTGTCACTA
TTGGATGAGG AAATAACAAT ACAAGCAATC GCTGACGAAA TCGGATATCA CAACGACTCA
TCATATATTA AAGCGTTTAA ATCGTACTTC GACATGACAC CACAACAATT TAGAGGCAAT
TCTAATCGAA AATACTATGA ATTATAA
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| Protein sequence | MISNQQLPAN EMMKNDPLFP ALAKVIEMPK GYVDSLHHHT WHQVIFPIKG LLQTQVGSYQ
YLLPHTSALF VPATLAHESI ALTNTTFIGI YINPAYCFKS EEQVRTISLT PFIKELIQEI
RRKCLQVESQ TALLGLLQVL HDQMMHNDVI TFQLLLPKDR RLKQIFDKLT ETPALDWPLK
IWGNEVGASE RTLSRLFVKE FKTSFPLWRQ QLRLIYSLSL LDEEITIQAI ADEIGYHNDS
SYIKAFKSYF DMTPQQFRGN SNRKYYEL
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