| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2050 |
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| Symbol | |
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| ID | 6987543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2195378 |
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| End bp | 2197738 |
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| Gene Length | 2361 bp |
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| Protein Length | 786 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643380338 |
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| Product | membrane protein |
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| Protein accession | YP_002263427 |
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| Protein GI | 209695498 |
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| COG category | [L] Replication, recombination and repair
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1474] Cdc6-related protein, AAA superfamily ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.200879 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAATTA TGAAACGATT CTCTCATTTC TTATTTCTTG CTTTCACTTT ACTGCTCTCT
CCGGTTAGCT ACGCGAGTTG GGGCCTAACA AATGATCAAC CGATTGAGAT CAGTAAACCC
GCTCAAGAAA TTGATACCGA GGTTCAAGCT CTTCCTGAAC AGCATTTTTT CTCAAACAAC
AATTACGCTC AGGTTAAGCG ACTTTTATCT AACACCATGC TTCAACAAAG TAAGCATACT
GAAAAACTAA GAGAAGCACT GACTGCGTAT AAAAATGACT CTACAGAAAA CAATTGGTTA
ACCGTAGAAG AAAATCATCA ATCATTAAAT TCATTAAACT TAAGTAAACA ACAGTTACTT
CAATTAACGG ACAATACAAC GCGAGAGCAA CTGACCGGAT TCGGTCCTTA CGGTGTAACT
CAGTTTTATT CAGAGCTCAG CATAACTCGG CTCAACATTG AATATTACTT ACACTACCAA
ATTCGTAGTT TCAAAAATTT ACTTCGTGAT TTAACGATTT CGCCAGTACC CGCGATTAGC
GTCATATTTA AAGTATTGTG TGTATTTTTT GTTTTTAATT GGTGGATGCG AAATAACGCT
CGCTTAATTA GTGACTTTAA AAAATTAAAA TTAGAAGGCG CGACAAAACC AAACCTTCTT
ATCCGTACTA TTTGGTATTT TAGCCGAGCA CAGAAAGCGA TTGCTTGGTT ATTACTTATC
ACGGTCACTC TTCGAATTAT TTCGACCTTA CCAAGCTTAC AACACCTTAT ATTCTTAGAG
ATCTTTACAT GGTGGATCTT AGGCGGTTCT ATTGCGGTAA GTTTGATTCT TGAATTTGCG
TATCGAAACA GCAAACACAA TAAAAAAGAA ACTATCGCAC TTCGTTTATC TACCATCCGT
CGCTATATTT GGGGTGCCAT TTTTGCTGGC GTAATTCTCC AAATTTCATC GCGAACGTTA
GGAGAAGGAA CGATTTATGC GTGGATTAAT TCTGCGGTGT ATTTATTCTT TATCTTGTTA
ACAATCATTA CTCTAAGGCA GTGGAAAGCA ACGATTTTTG AACGCATTCA TAATTTAGAC
CCATTACCTT TATCCATTCA TTGGGCTGTC AGAAATAAAA ATACATTCTT AATCTCAATT
ATCGCGACGG CTTGTGGTTC TGCATGGTTA GTTTGGCGAT CGATTCAGCA CGTCATCGTA
TCGACGTTAT CTCAATACAC AGCGTTCAGC CATGCACTCG CCTATTTGTT CCGAATTGAA
GTTGCAAAAC AAACGGAAGT CTCACGCGAA CAATCAAATC TAGTAAGGAT CAAGGGCGGA
CTCGCTTTTG ATTTTATTTC TCCGGGCTCT GAAGACTCTG AACTTATCGA AGATTACGCT
AAAGAAGAAA TGACGGCACT TTCTCGTTAT TTACTCACAG AAAGCCCTGC GGTGTGTGTT
CTATCTGGTG AGCGTGGCGT GGGCACAACA GCCCTACTCA ACCGTATTTT AAATAAAGTA
AAAAACGCCC AACCACTTTA CCTAAATTGC CCTTATGACG GTTATTCAGC TCTACTTCCT
GAATTAGCAA GACAACTTGG ACTATCAGAA GAATCGAGTG AAAGAGACAT TCTTCAACAC
CTGAGAAACA GTGACACATG CTATTTGCTT GCTTTTGATA ATGCTCAACG TTTGGTGAAA
CCTAAAGTCA ATGGGTTAGC TGATTTAATG AAGCTCACAA ATCTATTAAG ACGAGCAAGA
AAAAGCCATC GTGTTGTATT GGCTATTGAG AAATCAAGTT GGCGTTTTAT TGACCGAGCT
CGTGGAGAAA GATTGTTATT TGATTTGGTC ACTTTTATGC CTAAGTGGAC TGAGAAACAA
ATTGGCAGCT TATTAGAAAG CCGAATTGTA AAAACAAATG AGCAACAACT CTCTTTTGAT
GGCTTAGTTT TACCTAGACA ATGGGATGAA GAGACCTTAA CAGAAGAAGA ACGAGCTAAG
AATGGCTTTT ACCGCATTCT ATGGGATTAT TCTGATGGTA ACCCAACGGT TGCTTTGCGT
TTCTTTAGAT TGTCTCTGCA CCGTGATAAA GATACTGATG CCATTTTGGT TCGTTTATTT
AGAGCCCCGC ACTCTGATGA CCTAGAAACC ATGCCAAAAC CCATGCTGGC CGTATTGCGA
TCCATCGTAC AATTGGAAAT CGCATCTCCA GCGGATGTAT GTGAATGCAG TCGGTTAAGT
ATGGCTGAAG TGATCAGTAC ACTCCGCTAC TTCCAAAGTC GTGGGTACAT TGAATGGAGT
GATGATAAAG CTCGAATTTC AGATCATTGG TTCCGACACA TTACTAACGT ACTTCATCGT
CAACATTTAT TGGTGAAATA A
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| Protein sequence | MVIMKRFSHF LFLAFTLLLS PVSYASWGLT NDQPIEISKP AQEIDTEVQA LPEQHFFSNN
NYAQVKRLLS NTMLQQSKHT EKLREALTAY KNDSTENNWL TVEENHQSLN SLNLSKQQLL
QLTDNTTREQ LTGFGPYGVT QFYSELSITR LNIEYYLHYQ IRSFKNLLRD LTISPVPAIS
VIFKVLCVFF VFNWWMRNNA RLISDFKKLK LEGATKPNLL IRTIWYFSRA QKAIAWLLLI
TVTLRIISTL PSLQHLIFLE IFTWWILGGS IAVSLILEFA YRNSKHNKKE TIALRLSTIR
RYIWGAIFAG VILQISSRTL GEGTIYAWIN SAVYLFFILL TIITLRQWKA TIFERIHNLD
PLPLSIHWAV RNKNTFLISI IATACGSAWL VWRSIQHVIV STLSQYTAFS HALAYLFRIE
VAKQTEVSRE QSNLVRIKGG LAFDFISPGS EDSELIEDYA KEEMTALSRY LLTESPAVCV
LSGERGVGTT ALLNRILNKV KNAQPLYLNC PYDGYSALLP ELARQLGLSE ESSERDILQH
LRNSDTCYLL AFDNAQRLVK PKVNGLADLM KLTNLLRRAR KSHRVVLAIE KSSWRFIDRA
RGERLLFDLV TFMPKWTEKQ IGSLLESRIV KTNEQQLSFD GLVLPRQWDE ETLTEEERAK
NGFYRILWDY SDGNPTVALR FFRLSLHRDK DTDAILVRLF RAPHSDDLET MPKPMLAVLR
SIVQLEIASP ADVCECSRLS MAEVISTLRY FQSRGYIEWS DDKARISDHW FRHITNVLHR
QHLLVK
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