Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2029 |
Symbol | |
ID | 6987525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 2175149 |
End bp | 2176831 |
Gene Length | 1683 bp |
Protein Length | 560 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643380319 |
Product | hypothetical protein |
Protein accession | YP_002263408 |
Protein GI | 209695479 |
COG category | [R] General function prediction only |
COG ID | [COG2985] Predicted permease |
TIGRFAM ID | [TIGR01625] AspT/YidE/YbjL antiporter duplication domain |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0129834 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACATTG ATGTTGCGAC CTTGTTATCG CAAAACGATA TCTTACTTTT ATTCGTTGTT CTCGCTCTAG GCTTATTTAT AGCTAAAGTT AAAATCGGTA GCTTCCAATT AGGCAGTTCT ATCGGTGTTC TTATCACTGC CCTCTTTATG GGTAGTCTCG GATATACCTT CACCGCAGAT TCACTCAATA TTGGCTTTAT GCTATTTATT TTTTGTGTTG GTATTGAGGC TGGTCCAAAC TTCTTCGGTA TTTTCCTTCG TGATGGTAAG CACTACTTAT TACTTGTATT AGTCGTGTTA ATTTCAGCAA TTTCCCTTAG TTTCTTGACT GGTTATTACT TTAATCTCGA TTATGGCCTA TCGACAGGAA TGATGGCTGG AGCATTAACA GCAACGCCGG TATTGGTTGG TGCAAAAGAT GCCTTAAATT CTGGTTTAGC CGTACTCCCT GAAGGTGTTG ATTTCAGTAA AGTAATGGAT AATCTCAGTG TCGGTTATGC CTTCTCGTAT TTGATTGGCT TAACCAGCTT AATTTTATTG GCTCGATTAC TACCACAATT GCAGAAGCAA AACCTACAAG ACAGTGCGAT GCAAATAGCT CAAGAACGTG GGATCGGTAG CGCAGGACAA AGAAAAGTCT ATTTACCAAT CATTCGAGCA TATCGTGTAG GCCAAGAGCT TATTGACTGG ACTGATGGAA AAAACTTACG TGAACTTGGC ATCCACCGTC AAACTGGTTG TCATATCGAG CGTATTCGTC GTAACGGTAT TCTGGCGAAT CCAGATGGTG ATTATATCCT ACAACAAGGA GATGAAATTG CGCTTGTGGG TTACCCTGAT AGCCATGCTC GTCTTGATTC AAGCTTTAGA AACGGTAAAG AAGTATTTGA CCGTAACTTG CTTGATTTAC GTATTGCCGA GGAAGAGATT GTTGTAAAAA ATGACAACAT CGCAGGCAAA CGTTTATCCG AATTAAACTT ATCTGAATAT GGCTGCTTCT TGAACCGTGT AGTACGAGCT CAAATTGAAA TGCCAATTGA ACACGATATT GTTTTAGCGA AAGGAGACAT CCTTCAAGTC AGTGGCGAGA AAAGCAAGGT TCACCATATT GCGGATAAAA TTGGTTTCAT CTCAATCCAC AGTCAGGTAT CCGATTTATT AGCTTTCTGT AGCTTCTTTA TTCTTGGCAT TATGTTTGGC ATGATCACGA TGAGCTTTGG CCAAGTAACC TTTGGACTAG GCAACGCAGT CGGCTTATTG ATCTCAGGCA TCACCTTAGG CTTTTTAAGA GCCAACCACC CAACCTTTGG TTACGTGCCT CAAGGCGCAC TTAATATGAC CAAAAACCTA GGGCTTTTAG TCTTTATGGT AGGAATTGGA CTGAGTGCCG GTGGCAACAT TATTGAATAT TTCTCGGAAG ATGGTCTTAA AGTATTAGCC GCTGCACTTA TTGTAAGTGT GATTCCGGTG ATCCTTGCTT ATCTTGTTGG TGCTTATATT TTAAAAATGA ACCGTGCACT ATTAATCGGA GCGATTATTG GCGCTCGAAC TTGTGGTCCT GCGATGGATG TAGTGAATGA ACATGCCCGC AGTACGATTC CTGCACTTGG TTATGCTGGT ACTTATGCTA TTGCCAATAT CTTAATGACC GTTGCTGGTA CTATTATGAT TTTGTTAGCC TAA
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Protein sequence | MNIDVATLLS QNDILLLFVV LALGLFIAKV KIGSFQLGSS IGVLITALFM GSLGYTFTAD SLNIGFMLFI FCVGIEAGPN FFGIFLRDGK HYLLLVLVVL ISAISLSFLT GYYFNLDYGL STGMMAGALT ATPVLVGAKD ALNSGLAVLP EGVDFSKVMD NLSVGYAFSY LIGLTSLILL ARLLPQLQKQ NLQDSAMQIA QERGIGSAGQ RKVYLPIIRA YRVGQELIDW TDGKNLRELG IHRQTGCHIE RIRRNGILAN PDGDYILQQG DEIALVGYPD SHARLDSSFR NGKEVFDRNL LDLRIAEEEI VVKNDNIAGK RLSELNLSEY GCFLNRVVRA QIEMPIEHDI VLAKGDILQV SGEKSKVHHI ADKIGFISIH SQVSDLLAFC SFFILGIMFG MITMSFGQVT FGLGNAVGLL ISGITLGFLR ANHPTFGYVP QGALNMTKNL GLLVFMVGIG LSAGGNIIEY FSEDGLKVLA AALIVSVIPV ILAYLVGAYI LKMNRALLIG AIIGARTCGP AMDVVNEHAR STIPALGYAG TYAIANILMT VAGTIMILLA
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