Gene VSAL_I1980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1980 
Symbol 
ID6987491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp2122413 
End bp2122799 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content37% 
IMG OID643380277 
Producthypothetical protein 
Protein accessionYP_002263368 
Protein GI209695439 
COG category[S] Function unknown 
COG ID[COG3212] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTACTC GTCAGCCATT AGCTATACTT ATATTTAGCC TCTCAATGTG TTTATCGCCA 
TTGAGCTTTG CTCAAGATCA TGCAATTCCC GCAGTTCAAG ATATTATCCT CCCTCTCAAT
ACAACCATTG AGTTTGATGA AGACCGTGAT GAAATTATCA TGGCTGTAGA ACAAGGCCTT
ATTAAGCCCT TCTCAGCTCT TTATCAGACA GTAAACCAAG ACCTTTATGG CAGAATCATA
AAAGTTGAGT TAGAAGAAGA CGATGATGAA TGGACTTATG AGCTAAAACT TATCTACGAA
AATCAGATCA TAAAAGTTGA ATACAACGCG TCTTCTCTTC AAATGCTAGA GCTTAAAGGC
CGTCATCTAC AAAAGGTTAT AAAATAA
 
Protein sequence
MFTRQPLAIL IFSLSMCLSP LSFAQDHAIP AVQDIILPLN TTIEFDEDRD EIIMAVEQGL 
IKPFSALYQT VNQDLYGRII KVELEEDDDE WTYELKLIYE NQIIKVEYNA SSLQMLELKG
RHLQKVIK