| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1976 |
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| Symbol | |
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| ID | 6987487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2117471 |
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| End bp | 2118430 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643380273 |
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| Product | putative nickel transporter |
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| Protein accession | YP_002263364 |
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| Protein GI | 209695435 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2215] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAGTT CAAAAATGTT CAAACAGGCA ATGAAACCGG TTATCAATAT CTTAGTTTTT
ATTACGGTAA GTATTATTGC TCTGGATGTT TTATGGCAGG AGTGGCCTTC TTTGGTGATA
ACCAGTATTC ATATGCAGCG AGATATTTAT GCTGAATTAA GTGATCTTCT TTATGAAGCA
AAGGCAGATA ATGTAGCTTC GGGGTTGATG TTAATTGGCT TAAGTTTTTT ATATGGGATG
TTTCATTCAT TAGGTCCTGG ACATGGAAAG ATGATCGTAA CGACTTATCT GGTCACTCAT
CCAACCAAGG TGAACACCAG TTTACTTTTA ACCTTGTTAT CCTCAATGGT GCAGGCGCTT
GTCGCGGTTA CTTTAGTCTC TGTGCTTCTG GTTTTATTTA AAGCGTCAAT GCATGAAGTC
AATGCGCAAG CAGACCAATT CATTAGATTG AGTTTTTATA TTGTGTTGAT TCTTGGTGGC
TTAATTGTGA TTCGATCATT AAAGCAATTA TGGCGTTCTT TGAACAACCA AAAAGAAGGG
GGATTTAAAA TAAAAGGGGC AGTGAGGATC AGGTCGTCTT CTTTATTGAA CAATGAAAAT
ATAAATAATA CCGCGGTCTC TTCTTGTTCA TGCGGTCATA AACATTTTGC TACTGCAGAC
GAAATGAACC GTGCTTCTTC TATGAGAGAA TACGTCGGTA TTATTATTAG CATCGGCATG
CGGCCTTGTA CTGGGGCTAT AATGGTCTTA CTTTTTGCTA ATATGATTAA TATTTATTGG
CTTGGGGTGA TAAGTGCTTT TGTTATGGCG ATAGGCACTG CACTGACAAC ATCAACGATC
GCTGTGATGA CGATTACAGG AAAGAAAGTT GTGCAGCGTT ATTTAAAAGT AGCGAGTGAA
AGTGCACCAC GCGTAACTCG GATTCATTCA CTGTTGCAGC TAAGTGGGGG ATTGTCTTAA
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| Protein sequence | MISSKMFKQA MKPVINILVF ITVSIIALDV LWQEWPSLVI TSIHMQRDIY AELSDLLYEA
KADNVASGLM LIGLSFLYGM FHSLGPGHGK MIVTTYLVTH PTKVNTSLLL TLLSSMVQAL
VAVTLVSVLL VLFKASMHEV NAQADQFIRL SFYIVLILGG LIVIRSLKQL WRSLNNQKEG
GFKIKGAVRI RSSSLLNNEN INNTAVSSCS CGHKHFATAD EMNRASSMRE YVGIIISIGM
RPCTGAIMVL LFANMINIYW LGVISAFVMA IGTALTTSTI AVMTITGKKV VQRYLKVASE
SAPRVTRIHS LLQLSGGLS
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