Gene VSAL_I1975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1975 
Symbol 
ID6987486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand+ 
Start bp2116807 
End bp2117469 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content39% 
IMG OID643380272 
Productputative lipoprotein 
Protein accessionYP_002263363 
Protein GI209695434 
COG category[R] General function prediction only 
COG ID[COG3683] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTAAGT GGGCAAAAAC GATCTTGATA GCGGCGGCGT TTTTTCCTTG TATTGTGTTT 
GCTCATCCTC ATTCTTGGGT TGATATGACA ACAACAATTG AAGGTACCGA AAATACAATT 
ACTGGTTTAG CAATGAATTG GACGTTTGAT GCAATGACAT CTGCATATGC TCTTGATGGG 
GAGGATTTAT CTTCTGAGAA TAGAGTGGAA ACGATGAGAA AATTGGCTGA TTCAATGATA 
AATAATGTTT CAGGTTCACA TTATTACACC TATTTTGATG AGAATAAAAC ACCGATAAAA 
TTTACACTGC ATCAGCATGG GCGATTAACT CAAAAGAAAG GGAAACTAAC GCTTTCTTTT 
GATTTACGCT TGGATAAACC TCAAAAAATC ACATCATCGT CGCTTAACTT AAGGGTTTTT 
GAGCCCAGTT TTTATGTTGA TATGGCATGG AAAAATGAGA CATCAATTAC GCTTTCGAAA 
GCATTATCTC AACAATGTCG GGTTGAAATC ATAACCCCTC ATCCAACCGC AAAACAGATG 
GCTTACGCGA TGTCATTGCC TCAAGATGCC GCCCCTGATA ATGCATTGGG GCAACTGTTT 
ACACAACGTG CGGTTGTTCA TTGCAAAGCA GATATGAATC AAAAAGGTGA AGTGAGTGAA 
TAA
 
Protein sequence
MPKWAKTILI AAAFFPCIVF AHPHSWVDMT TTIEGTENTI TGLAMNWTFD AMTSAYALDG 
EDLSSENRVE TMRKLADSMI NNVSGSHYYT YFDENKTPIK FTLHQHGRLT QKKGKLTLSF 
DLRLDKPQKI TSSSLNLRVF EPSFYVDMAW KNETSITLSK ALSQQCRVEI ITPHPTAKQM 
AYAMSLPQDA APDNALGQLF TQRAVVHCKA DMNQKGEVSE