| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1960 |
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| Symbol | aotM |
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| ID | 6988240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2100542 |
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| End bp | 2101219 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643380255 |
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| Product | arginine/ornithine periplasmic binding protein-dependent transporter, inner membrane component |
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| Protein accession | YP_002263349 |
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| Protein GI | 209695420 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.223037 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATTTTT CAATTATTAT TGAGAGCCTA CCCGTTTATT TGGATGGCCT TTGGACTACT
GTTTGGTTAG TCGCTTTATC TCTTATTATT GGGTTGTGCA TTGCCGTCCC TACCGCGATT
GCTAGAAACA GCAATAATCC ATTAATTTGG GTTCCTGCGT GGGCCTATAT TTATTTCTTT
CGCGGTACAC CATTACTGAT CCAACTGTAT CTGATTTATT ACGGAATGGA TCAGTTTTAT
CCCGTGAAAG ACACGGTATG GGAACATGCA TCATTTTGTG CATTGGTTGC GTTTGCATTA
AATACAGGCG CTTATACTTC GGAGATCGTT CGAGGCTCTA TTAATGGCTT ACCTCAAGGT
GAAATTGAAG CGGCAAAAGC GTATGGCATG AGTCAATTTC AAACTTATAA ACGCATTATT
TTACCGAGTG CATTACGCAG AGCGTTGCCA GCATACAGTA ATGAAGTGAT TTTCATGTTA
CATGGTTCTG CGATTGCAGG CATTGTAACT TTGATGGATT TGACTGGCGC AGCACGATTA
GTGAATTCTC GTTACTACGC ACCTTTTGAG TCATATATTG CGGCAGGTTT GTTTTACATG
TGTCTAACGT TCATTATTAT TTTTGTATTT AAACAGTTAG AAACACGAAT GCTTAGATTT
ATGAGACCAT TAAGTTAA
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| Protein sequence | MDFSIIIESL PVYLDGLWTT VWLVALSLII GLCIAVPTAI ARNSNNPLIW VPAWAYIYFF
RGTPLLIQLY LIYYGMDQFY PVKDTVWEHA SFCALVAFAL NTGAYTSEIV RGSINGLPQG
EIEAAKAYGM SQFQTYKRII LPSALRRALP AYSNEVIFML HGSAIAGIVT LMDLTGAARL
VNSRYYAPFE SYIAAGLFYM CLTFIIIFVF KQLETRMLRF MRPLS
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