| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1959 |
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| Symbol | aotQ |
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| ID | 6988237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2099799 |
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| End bp | 2100539 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643380254 |
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| Product | arginine/ornithine periplasmic binding protein-dependent transporter, inner membrane component |
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| Protein accession | YP_002263348 |
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| Protein GI | 209695419 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4215] ABC-type arginine transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.450154 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTAGATT TGCAAGGATA TGAGTCCTCG ATTTTAGATG GGGCATTAGT TACGTTACAA
GTCGCACTGC TATCACTCAT TTTAGCCGTG TTTTTAGGGA TGTTAGGTGC GTTAGCTAAA
TTAGCGCCGT ATCGCTGGGC TCGATCTATT GCGACAGTCT ACACTACCGT TGTTCGTGGT
ATTCCTGATC TTGTCTTAAT GATGTTGCTA TTTTTTGGCG GACAGATGCT ATTGAATAAT
GGCCTGTATG AGTCAAATGA ATGGATCAAC GAATGGATGA CAAGTTCAGA CCCAAATCAT
GAATGGGTTG CCTATCTTCC TGATTATATA GAAATTAGTC CATTTATTGC TGGTGTTCTT
ACGATAGGTT TCATTTTTGG TGCTTATATG GCAGAGACGT TTCGTGGGGC GATTATGGCT
GTTGACCGAG GCGAAATGGA AGCAGCCAAA GCCTATGGTA TGAGTGGTCC AATGGCCTTC
CGTCGTATTT TGTTTCCACA GATGATTAGG CATGCGTTAC CGGGTTTTGG TAATAACTGG
TTAGTGTTAT TAAAAACGAC CGCTTTAGTT TCAATCATTG GATTAGAAGA CATGGTTCGT
GTTAGTTCTA TGGCAGCTGG TACAACCAAA ATGCCGTTTA CTTTTTATAT GACCGTTGCT
TGTATTTTCT TATTATTCAC TGCCGTGTCG ACTGGTGCTT TAAAACTGGT TGAGCGTAAA
TTTAGTATTC ATACGAGGTA A
|
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| Protein sequence | MLDLQGYESS ILDGALVTLQ VALLSLILAV FLGMLGALAK LAPYRWARSI ATVYTTVVRG
IPDLVLMMLL FFGGQMLLNN GLYESNEWIN EWMTSSDPNH EWVAYLPDYI EISPFIAGVL
TIGFIFGAYM AETFRGAIMA VDRGEMEAAK AYGMSGPMAF RRILFPQMIR HALPGFGNNW
LVLLKTTALV SIIGLEDMVR VSSMAAGTTK MPFTFYMTVA CIFLLFTAVS TGALKLVERK
FSIHTR
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