| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1958 |
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| Symbol | aotJ |
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| ID | 6988239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2098933 |
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| End bp | 2099709 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643380253 |
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| Product | arginine/ornithine periplasmic binding protein-dependent transporter |
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| Protein accession | YP_002263347 |
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| Protein GI | 209695418 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.488249 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGAAGT GGTTATTAGC AGCAATTGTT GCATCTACAG CCGTTACTGG CGCAGCTCAA
GCAAAAGAAT GGAAGCAAAT TCGATTTGGT ATTGAAGGGG CATATCCTCC ATTTAGTTGG
ACTGAACCAT CAGGTGAACT GAAAGGGTTT GATGTCGATA TCGCTAACGC ACTATGTAAA
GAGATGGAAG CTCGTTGTAA GATCGTTGCT CAAGATTGGG ATGGTATTAT CCCATCACTA
TTGGCTCGTA AATATGATGC GATTATTGCA GCAATGTCTA TTACAGAAGA GCGCAAGAAA
AAAATCGATT TCACTGAGAA ATACGCACTG ATCCCGAATA AATTTGTTGC TAAAAAAGGC
ACAGAATTAG TCATGACTAA AGAAGGTCTA AAAGGGGTAA CCGTTGGTGT TCAACGCGCG
ACAACACACG ATAAATATTT GACAGACAAC TTTGGTTCTG GTGTTGAGCT TAAGCGTTAT
GGCTCATTTG ATGAAGCATA TCTAGATCTT AAAGCGGGTC GTATTGATAC TGTTCTTGGT
GATGCATCAG CATTAGAAGA AGGGTTACTA AACAAACCTG GCGGTAAAGA ATACGAATTT
GTTGGTCCTT CGCTAACGGA TCCAAAATGG TTTGGTGATG GGTTTGGTAT CGCAACTCGC
AAACAAGATA AAGATTTAAC AAAACAATTG AATGCCGCAA TTGATTCACT TCGTGAAAAA
GGTGTTTATC AAGAAATTGC AGCAAAATAC TTCAACTATG ATGTATATGG TGAATAA
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| Protein sequence | MKKWLLAAIV ASTAVTGAAQ AKEWKQIRFG IEGAYPPFSW TEPSGELKGF DVDIANALCK
EMEARCKIVA QDWDGIIPSL LARKYDAIIA AMSITEERKK KIDFTEKYAL IPNKFVAKKG
TELVMTKEGL KGVTVGVQRA TTHDKYLTDN FGSGVELKRY GSFDEAYLDL KAGRIDTVLG
DASALEEGLL NKPGGKEYEF VGPSLTDPKW FGDGFGIATR KQDKDLTKQL NAAIDSLREK
GVYQEIAAKY FNYDVYGE
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