Gene VSAL_I1953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1953 
SymbolpflA 
ID6987473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp2091688 
End bp2092425 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content40% 
IMG OID643380248 
Productpyruvate formate lyase-activating enzyme 1 
Protein accessionYP_002263342 
Protein GI209695413 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1180] Pyruvate-formate lyase-activating enzyme 
TIGRFAM ID[TIGR02493] pyruvate formate-lyase 1-activating enzyme 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGTAG GTCGTATTCA CTCTTTTGAA TCTTGTGGTA CCGTTGATGG TCCTGGTATT 
CGCTTTATCA TTTTTTTACA AGGCTGCTTA ATGCGTTGTA TGTATTGCCA TAATCGCGAT
ACTTGGGATA CACATGAAGG CAAAGAAGTC TCTGTGACTG AATTAATCGA AGAAGCCAAA
AGCTACCGTC ACTTTATGAA AGCGTCAGGT GGCGGCATTA CCTGTTCTGG TGGTGAAGCC
ATGCTTCAAC CAGAATTCGT ACGTGATTTC TTTCAAGCAG CACAAGCCGA AGGCATGCAC
ACGTGTTTAG ATACCAATGG CTATATTCGT AAGCATACTG ATGTCGTTGA TGAAGTTCTT
GCTGCTTCTG ATCTTGTTAT GCTTGATATT AAGCACATGA AAGATGAAAT CCACCACGAT
TTTATTGGTG TATCAAATAG ACGAACATTG GACTTTGCTC GTTACCTGCA TAAGATCGGT
AAAAAAACAT GGATCCGTTA CGTAATTGTT CCTGGCTACA CTGATGATGA AGAATCAGCA
CACATGCTAG GTGATTTCAT TAAAGATATG GATAACATAG AGAAAGTAGA ATTACTTCCA
TACCACCAAC TTGGTGCCCA TAAATGGGAA GCAATGGGTT TAAAATATCC GCTTGATGGT
GTTAATCCTC CTTCAAAAGA GACAATGGAA AAAATGGTTG CTATCCTAAG CCAATATCAC
GATAACGTTA GATACTGA
 
Protein sequence
MSVGRIHSFE SCGTVDGPGI RFIIFLQGCL MRCMYCHNRD TWDTHEGKEV SVTELIEEAK 
SYRHFMKASG GGITCSGGEA MLQPEFVRDF FQAAQAEGMH TCLDTNGYIR KHTDVVDEVL
AASDLVMLDI KHMKDEIHHD FIGVSNRRTL DFARYLHKIG KKTWIRYVIV PGYTDDEESA
HMLGDFIKDM DNIEKVELLP YHQLGAHKWE AMGLKYPLDG VNPPSKETME KMVAILSQYH
DNVRY