Gene VSAL_I1933 details

Gene Information

• Locus tag: VSAL_I1933
• Symbol: folE
• ID: 6988819
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 2067717
• End bp: 2068370
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 643380231
• Product: GTP cyclohydrolase I
• Protein accession: YP_002263325
• Protein GI: 209695396
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0302] GTP cyclohydrolase I
• TIGRFAM ID: [TIGR00063] GTP cyclohydrolase I

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.669415
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCATCAT TCAGTGAATC AGCCATTTTG GTGCGTGATG CTCTTGTTGC GCGTGGCCTT 
GAGACGCCAA TGAAAGAAAA TGGAATTAGT CGTGAAGAGA AAAAAGAACG TATTGAAGAG 
CATATGCGTG AGATTTTATC TCTGCTTACT CTCGACCTTA GTGATGACAG CCTTGAAGAG 
ACGCCTCATC GAATTGCTAA GATGTACGTT GATGAAATCT TTTCTGGGTT AGATTATGCG 
AATTTCCCTA AAATTACCGT CATTGAAAAT AAAATGAACT GTGATGAAAT GGTTCGAGTG 
AACGACATTA CATTAACGAG TACGTGTGAA CATCATTTAG TGACTATTGA TGGAAAAGCC 
ACCGTTGCTT ATATTCCTCG TGAAAAGATC ATTGGTCTGT CGAAGATTAA TCGTATTGTT 
CGATTTTTTG CCCAGCGTCC TCAAGTTCAA GAGCGTATGA CACAGCAAAT ATTAGTGGCA 
CTGCAAACAT TACTTGGCAG TGATGATGTT GCGATCACAA TGGAAGCGAC ACATTATTGT 
GTTAAGTCTC GTGGTGTCAT GGATGCGACG AGTAGCACAA CGACAACTGC GCTTGGCGGG 
ATTTTCAAAC GTAATCCAGC GACAAGACAT GAATTTTTAA GTGGCATTCG TTAA 

 

Protein sequence

MSSFSESAIL VRDALVARGL ETPMKENGIS REEKKERIEE HMREILSLLT LDLSDDSLEE 
TPHRIAKMYV DEIFSGLDYA NFPKITVIEN KMNCDEMVRV NDITLTSTCE HHLVTIDGKA 
TVAYIPREKI IGLSKINRIV RFFAQRPQVQ ERMTQQILVA LQTLLGSDDV AITMEATHYC 
VKSRGVMDAT SSTTTTALGG IFKRNPATRH EFLSGIR