| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1920 |
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| Symbol | |
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| ID | 6987456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2053473 |
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| End bp | 2054327 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643380221 |
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| Product | inner membrane protein |
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| Protein accession | YP_002263315 |
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| Protein GI | 209695386 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00950] Carboxylate/Amino Acid/Amine Transporter
[TIGR01167] LPXTG-motif cell wall anchor domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0119644 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTATT TACTTTCAAT AACCTTACTT TGGGCCTTTT CATTCAGTTT AATTGGCGTG
TATTTAGCAG GACAAGTCGA TGCTTGGTTC TCTGTCTTAA TGCGAATAGG CCTAGCTACA
CTTGTTTTTC TTCCTTTCTT ACGTCCAAAA CAAGTCCCTT TGCCAATCGC TATTAAATTA
ATGCTCATTG GCGCGATCCA ACTTGGGTTA ATGTACGTTT TCTATTATCA ATCTTTTCTC
TATTTAACGG TTCCTGAAGT TTTACTTTTC ACCGTAATGA CACCCATTTA TATCACCTTA
TTAAACGATG CTTTTGAAGG TAAATTTCAC CCTCACTTTA TGATCAGCGC TCTCATTGCC
ACTCTTGGAG CAATAGCTAT CCGATACAAT GGTATAGATG CCGGGTTTTT ATTAGGCTTT
GCTACCGTAC AAGGCGCGAA CCTTTGCTTT GCAACAGGAC AAGTCACTTA TAAACGATTA
ATGAAAGATA ACCAACTTGA ACAAAAAAAC GTATTTGGTT TTTTCTTTAT TGGCGCGTTG
GTTGTGGCAA GCGTGTGTTA TGCCCTTTTT GGAAATAGTG AAAAACTTCC AACAACATCG
ACACAATGGG GAGTATTAGT TTATCTAGGG ATAATTGCTT CTGGGCTTGG CTATTTCATG
TGGAATAAAG GGGCAACACT GGTCAATGTT GGCGTTCTAG CAGTCATGAA TAATTTATTA
ATTCCAGCGG GGATATTAGT CAACTTAGTC ATTTGGAATC GCGATGCTGA TATATTCCGT
TTAAGCCTTG GTGGAGGATT AATTCTCATC GCTTTAATCG TCAACCAACA ATTAGAAAAA
CGACGTTCTC GATAA
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| Protein sequence | MSYLLSITLL WAFSFSLIGV YLAGQVDAWF SVLMRIGLAT LVFLPFLRPK QVPLPIAIKL
MLIGAIQLGL MYVFYYQSFL YLTVPEVLLF TVMTPIYITL LNDAFEGKFH PHFMISALIA
TLGAIAIRYN GIDAGFLLGF ATVQGANLCF ATGQVTYKRL MKDNQLEQKN VFGFFFIGAL
VVASVCYALF GNSEKLPTTS TQWGVLVYLG IIASGLGYFM WNKGATLVNV GVLAVMNNLL
IPAGILVNLV IWNRDADIFR LSLGGGLILI ALIVNQQLEK RRSR
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