| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1860 |
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| Symbol | |
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| ID | 6987427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 1994990 |
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| End bp | 1996288 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643380159 |
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| Product | putative response regulator |
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| Protein accession | YP_002263256 |
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| Protein GI | 209695327 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.436307 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTAA TTAAGCTCTC TTCTTTTCTC ATTATCGATG ACAGTAGCGT TATTCAAAAC
GCCATTCGAG CCTTATTAAG TCGTATAGGT GTTCCAACTA ATAACATCGC TTGTTGCCCC
ACCGCAGGTG CCGCCGTTGG TAATTGTAAA CGTCAAAAGT ATGATGTTCT CTTTGTTGAT
CATAATTTAG GCCATGGCAG CACTGGTTTA CAGATGCTAG AACAACTGCG TCTATTAAAA
CTGATTAATG ACAACACGCT AGTCTATATA GTCACAGGTA ATGAAGACCC TCAAATAGAG
TTAGCCTATA CCGACTATTC TCCATCTAAA TATATACAAA AGCCCATACG CCCAGAAGAG
ATAATCAACG TCATTAATAG TGATTTAATT AAACGTCAAT TTGCGATGGC GATGATTGGA
GCTTATACAA AGCAAGGATT AGCCGGTGTA AAACCACTGA TTTTCAAGTC ACCAAACAAA
ATCATTCTAC AAACAGCCAT GCTAAAACTT GCAAATCGAT TAATTAAAGT TAACCGATTA
TCTGAAGCAT TGAGCGTAAA CAAGGCCTTA ATATCCATTG TAAAAGAATC TGTTGAAGCC
GATATTCAAC GCGCTGAAAT ATGTATTGCA CAAGTCGATT ATAATTCTGC AAACCAGTTA
CTCGATACTC TATTACAAAA AAATGAAAGC CATTTAAAAT TACTGGATTT AAAAGCAGAG
ATCGCCTTTA ACACCGATAA TATTGCTCTC GCCACCCGCT ATTGGAAAAA AGCATTTGAA
CTAGCTCCTT ATTCTTATAT GCGATTTAGC TACTTAATTT GGTCTCTTCT TGCAAAGGGA
GACCGCTATG ATGCCTTTGA TTTACTGACA AAATACGCGT ATCTCTTACC CCACTCTGCT
TTTGATTCCG CCGGCAGAAG AGCCTTAACC GCTTGGGCTG ATATGCATGT TGCACCCGAG
GAAATCCTGC AAGAATGGTC ACCAGAGAGC TCATGGCAAC GTGTTAGTGC AAAACTAAAA
GGCCGATTAA GAGGAATACC AAGTATTGCA GCCCAGCGCG CATTATCTGC ATTATGGCAG
CTTAAAATGA ATCGTTACGG TGAAGCAAAT CGCCTTATAT CTGACATTCA ACTGTCTGAC
ATTACTGATT ATGAAACCGC TTATATCGTT TATCTCGTGT ATTGTGAGAT GAAATTAGAT
GATGAGAAAA AAATAATTGA AGACAAATGG TTGGCGAAGC TAAGACAGGG GAAAAGCATT
CTTGCGAAAT TACAAACGTT AGTTTTCGAG AAAGCATAA
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| Protein sequence | MKLIKLSSFL IIDDSSVIQN AIRALLSRIG VPTNNIACCP TAGAAVGNCK RQKYDVLFVD
HNLGHGSTGL QMLEQLRLLK LINDNTLVYI VTGNEDPQIE LAYTDYSPSK YIQKPIRPEE
IINVINSDLI KRQFAMAMIG AYTKQGLAGV KPLIFKSPNK IILQTAMLKL ANRLIKVNRL
SEALSVNKAL ISIVKESVEA DIQRAEICIA QVDYNSANQL LDTLLQKNES HLKLLDLKAE
IAFNTDNIAL ATRYWKKAFE LAPYSYMRFS YLIWSLLAKG DRYDAFDLLT KYAYLLPHSA
FDSAGRRALT AWADMHVAPE EILQEWSPES SWQRVSAKLK GRLRGIPSIA AQRALSALWQ
LKMNRYGEAN RLISDIQLSD ITDYETAYIV YLVYCEMKLD DEKKIIEDKW LAKLRQGKSI
LAKLQTLVFE KA
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